RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SUN1O94901 812 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 FAM13AO94988 1023 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 CALCAP01258 141 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 MSH2P43246 934 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 CLEC4GQ6UXB4 293 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 TPTE2Q6XPS3 522 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 CAPN12Q6ZSI9 719 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 TAOK1Q7L7X3 1001 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF804AQ7Z570 1209 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 SRRM1Q8IYB3 904 aaKnown RBP13.89□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
COL8A1-202ENST00000273342 NENFQ9UMX5 172 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
COL8A1-202ENST00000273342 RHBDL3P58872 404 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF268Q14587 947 aaPredicted RBP13.89□□□□□ -0.19
COL8A1-202ENST00000273342 CAPRIN2Q6IMN6 1127 aaKnown RBP13.89□□□□□ -0.19
COL8A1-202ENST00000273342 SH2D3AQ9BRG2 576 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 INTS2Q9H0H0 1204 aaKnown RBP13.89□□□□□ -0.19
COL8A1-202ENST00000273342 HOMER3Q9NSC5 361 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 FAM187AA6NFU0 413 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 FAM86B1E9PN63 330 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 EML1O00423 815 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 CLDN3O15551 220 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 GSTA1P08263 222 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 PDHA1P08559 390 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 FAM86B2P0C5J1 330 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 BRAFP15056 766 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 TM4SF1P30408 202 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 STX2P32856 288 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF76P36508 570 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 DLG4P78352 724 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 CALCOCO2Q13137 446 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 DHX34Q14147 1143 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 DAB2IPQ5VWQ8 1189 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 SPATA21Q7Z572 469 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 METTL14Q9HCE5 456 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 SCNN1DP51172 638 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 UBL4BQ8N7F7 174 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 SYT2Q8N9I0 419 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ZBTB10Q96DT7 871 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 GPR88Q9GZN0 384 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ADAM22Q9P0K1 906 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ZMYND8Q9ULU4 1186 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 RABGAP1Q9Y3P9 1069 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 TTLL1O95922 423 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 CACNB3P54284 484 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 TAF11Q15544 211 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 C2CD6Q53TS8 623 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF449Q6P9G9 518 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 CD209Q9NNX6 404 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
COL8A1-202ENST00000273342 DDX4Q9NQI0 724 aaKnown RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-202ENST00000273342 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 EXOC3O60645 756 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 SPAG7O75391 227 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 CHRNA3P32297 505 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 NPEPPSP55786 919 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 SATB1Q01826 763 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 MGAT5Q09328 741 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 HYIQ5T013 277 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 VSTM1Q6UX27 236 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 EPM2AIP1Q7L775 607 aaPredicted RBP13.87□□□□□ -0.19
COL8A1-202ENST00000273342 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 GPR75-ASB3A0A0A6YYF3 556 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 TARSP26639 723 aaKnown RBP13.87□□□□□ -0.19
COL8A1-202ENST00000273342 COILP38432 576 aaPredicted RBP13.87□□□□□ -0.19
COL8A1-202ENST00000273342 GTF2IP78347 998 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 MYL7Q01449 175 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 ZC3H3Q8IXZ2 948 aaKnown RBP13.87□□□□□ -0.19
COL8A1-202ENST00000273342 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 AGPAT1Q99943 283 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 CCNL1Q9UK58 526 aaPredicted RBP13.87□□□□□ -0.19
COL8A1-202ENST00000273342 LAMB1P07942 1786 aa13.87□□□□□ -0.19
COL8A1-202ENST00000273342 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ATP2A2P16615 1042 aaKnown RBP13.86□□□□□ -0.19
COL8A1-202ENST00000273342 GCLMP48507 274 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 GPSM2P81274 684 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ATP11AP98196 1134 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 TCP10Q12799 353 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 FOXR2Q6PJQ5 311 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms