RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CKBP12277 381 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 MAPK1P28482 360 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 IFNAR2P48551 515 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 GABREP78334 506 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 CYP4F8P98187 520 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 LONRF2Q1L5Z9 754 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ARHGAP36Q6ZRI8 547 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 LONP2Q86WA8 852 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 HACE1Q8IYU2 909 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 GRK7Q8WTQ7 553 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ZNF566Q969W8 418 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 NELL2Q99435 816 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ACAT2Q9BWD1 397 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 POLMQ9NP87 494 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 CLEC4AQ9UMR7 237 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 STX8Q9UNK0 236 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ALKQ9UM73 1620 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 CTAGE15A4D2H0 777 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 BAIAP3O94812 1187 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CTAGE8P0CG41 777 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 ITGAXP20702 1163 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 ERFP50548 548 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 AKR1D1P51857 326 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 NLRP6P59044 892 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 SPIRE1Q08AE8 756 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 MILR1Q7Z6M3 343 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 SPATA2LQ8IUW3 424 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 ARID3BQ8IVW6 561 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CTAGE4Q8IX94 777 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 USP28Q96RU2 1077 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CARD6Q9BX69 1037 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CALN1Q9BXU9 219 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CHMP1AQ9HD42 196 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 C15orf38-AP3S2A0A0A6YYH1 394 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 MATN2O00339 956 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 TSPAN6O43657 245 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 ATP6V1B1P15313 513 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CCT4P50991 539 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CAVIN4Q5BKX8 364 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 DCAF17Q5H9S7 520 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 HYIQ5T013 277 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CHD1LQ86WJ1 897 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 MRPS27Q92552 414 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 SLC35B4Q969S0 331 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 TRIM55Q9BYV6 548 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 TPK1Q9H3S4 243 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CLK4Q9HAZ1 481 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 TRPS1Q9UHF7 1281 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 POU2F1P14859 743 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 GBE1Q04446 702 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 TTF1Q15361 905 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 DEPDC1Q5TB30 811 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CNNM4Q6P4Q7 775 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 NUP93Q8N1F7 819 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 ANKRD53Q8N9V6 530 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 THAP11Q96EK4 314 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CEP95Q96GE4 821 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 KBTBD4Q9NVX7 518 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 CFL2Q9Y281 166 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 RBMX2Q9Y388 322 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 SLC30A1Q9Y6M5 507 aa9.47□□□□□ -0.89
CTDSPL-201ENST00000273179 A8MVJ9 347 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 GLRX3O76003 335 aaKnown RBP9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 CRYZL1O95825 349 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 LIMK1P53667 647 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 PPP2R2AP63151 447 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 DAB2IPQ5VWQ8 1189 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 OTUD7BQ6GQQ9 843 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 TTLL7Q6ZT98 887 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 LRRTM3Q86VH5 581 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 TRMT2AQ8IZ69 625 aaKnown RBP9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 FATE1Q969F0 183 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 C8orf76Q96K31 380 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 BRD7Q9NPI1 651 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 PCDHGB7Q9Y5F8 929 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 VWA3AA6NCI4 1184 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 PEX1O43933 1283 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 OXSR1O95747 527 aaPredicted RBP9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 FOSL2P15408 326 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 PDHA2P29803 388 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 SPAG1Q07617 926 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 DHX9Q08211 1270 aaKnown RBP9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 CDC16Q13042 620 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 CCDC129Q6ZRS4 1044 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 SYCE1Q8N0S2 351 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 C12orf50Q8NA57 414 aaPredicted RBP9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 ZNF527Q8NB42 609 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 TMX3Q96JJ7 454 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 PHACTR3Q96KR7 559 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 ART5Q96L15 291 aa9.46□□□□□ -0.89
CTDSPL-201ENST00000273179 H7C0C1 242 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 GSTA2P09210 222 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms