RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NT5C3AQ9H0P0 336 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DDX47Q9H0S4 455 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DICER1Q9UPY3 1922 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 A0A087X0T9 212 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CCT8L1PA6NM43 557 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SART1O43290 800 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DAPK3O43293 454 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SERPING1P05155 500 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 FAM228BP0C875 321 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CYP11B2P19099 503 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 VCAM1P19320 739 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PPP1R2P41236 205 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RPS6KA3P51812 740 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ARSHQ5FYA8 562 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ARMC3Q5W041 872 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CRELD2Q6UXH1 353 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 LRRC55Q6ZSA7 311 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ITFG2Q969R8 447 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GLT8D2Q9H1C3 349 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 HOMER3Q9NSC5 361 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ADAMTS1Q9UHI8 967 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CYP3A7P24462 503 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 POLR2FP61218 127 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 AP3B2Q13367 1082 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RPS6KA1Q15418 735 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TBC1D1Q86TI0 1168 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 AGAP11Q8TF27 550 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 P3H4Q92791 437 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RAVER2Q9HCJ3 691 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 EIF4E1BA6NMX2 242 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MSH4O15457 936 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RAB27AP51159 221 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 VGLL4Q14135 290 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TAX1BP1Q86VP1 789 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CCDC197Q8NCU1 140 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KDM3AQ9Y4C1 1321 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CHMP2AO43633 222 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 NOL4O94818 638 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CASP5P51878 434 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SLC18A3Q16572 532 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 COBLL1Q53SF7 1204 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DNAAF5Q86Y56 855 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SCYL3Q8IZE3 742 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 EIF1ADQ8N9N8 165 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 XPO6Q96QU8 1125 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 LRRC27Q9C0I9 530 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 AMACRQ9UHK6 382 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DHX9Q08211 1270 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TRAF1Q13077 416 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DCAF15Q66K64 600 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TSG101Q99816 390 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 EML1O00423 815 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ZBTB39O15060 712 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SREBF1P36956 1147 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ZC3H12AQ5D1E8 599 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 HYIQ5T013 277 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TMC3Q7Z5M5 1100 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SCFD1Q8WVM8 642 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CEP72Q9P209 647 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CORO1CQ9ULV4 474 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RSPH10BP0C881 870 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ITGA4P13612 1032 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PSMD2Q13200 908 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MTMR3Q13615 1198 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RAPGEF1Q13905 1077 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 NAP1L4Q99733 375 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 LSM14BQ9BX40 385 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KIF4AO95239 1232 aa17.2■□□□□ 0.34
MAP1LC3B-201ENST00000268607 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
MAP1LC3B-201ENST00000268607 OTUD5Q96G74 571 aa17.2■□□□□ 0.34
MAP1LC3B-201ENST00000268607 FAM129AQ9BZQ8 928 aa17.2■□□□□ 0.34
MAP1LC3B-201ENST00000268607 DPH5Q9H2P9 285 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms