RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 LRIG3Q6UXM1 1119 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 METTL13Q8N6R0 699 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 RUBCNQ92622 972 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
VPS33A-201ENST00000267199 A0A087X0T9 212 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 FAM187AA6NFU0 413 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 CFLARO15519 480 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 SLC37A4O43826 429 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 FAM228BP0C875 321 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 KITP10721 976 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
VPS33A-201ENST00000267199 IRX1P78414 480 aaPredicted RBP12.34□□□□□ -0.43
VPS33A-201ENST00000267199 RFX6Q8HWS3 928 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
VPS33A-201ENST00000267199 CALN1Q9BXU9 219 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 ISCUQ9H1K1 167 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 BATF3Q9NR55 127 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 A0A1W2PQJ5 194 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 ABL1P00519 1130 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 POLD1P28340 1107 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 MTERF2Q49AM1 385 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 PRR5LQ6MZQ0 368 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 ZBTB8OSQ8IWT0 167 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 PRPF38AQ8NAV1 312 aaKnown RBP12.34□□□□□ -0.43
VPS33A-201ENST00000267199 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 REEP2Q9BRK0 252 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
VPS33A-201ENST00000267199 RNF8O76064 485 aa12.33□□□□□ -0.43
VPS33A-201ENST00000267199 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.43
VPS33A-201ENST00000267199 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.43
VPS33A-201ENST00000267199 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.43
VPS33A-201ENST00000267199 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.43
VPS33A-201ENST00000267199 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.43
VPS33A-201ENST00000267199 ANLNQ9NQW6 1124 aa12.33□□□□□ -0.43
VPS33A-201ENST00000267199 TRPC6Q9Y210 931 aa12.33□□□□□ -0.43
VPS33A-201ENST00000267199 TMEM120BA0PK00 339 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 FAM153BP0C7A2 387 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 GRB10Q13322 594 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 DBN1Q16643 649 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 FAM153CQ494X1 144 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 CENPUQ71F23 418 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 TRIM11Q96F44 468 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 FGD4Q96M96 766 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 FAM153AQ9UHL3 310 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 FAM237AA0A1B0GTK4 181 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 SLC16A4O15374 487 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 ATP5HO75947 161 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 ANP32DO95626 131 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 AGTP01019 485 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 C1orf146Q5VVC0 180 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 PASD1Q8IV76 773 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 DAGLBQ8NCG7 672 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 SH2D3AQ9BRG2 576 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 PACSIN1Q9BY11 444 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 KIF9Q9HAQ2 790 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 SMYD2Q9NRG4 433 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 IPO5O00410 1097 aaKnown RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 EYA4O95677 639 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 MYBL2P10244 700 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 PAX7P23759 505 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 SOX5P35711 763 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 YWHAEP62258 255 aaKnown RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 ALCAMQ13740 583 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 NAB2Q15742 525 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 LRRC36Q1X8D7 754 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
VPS33A-201ENST00000267199 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 ZNF341Q9BYN7 854 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 BCAP29Q9UHQ4 241 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 ABCB11O95342 1321 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 SPATA31A1Q5TZJ5 1347 aa12.33□□□□□ -0.44
VPS33A-201ENST00000267199 GPR75-ASB3A0A0A6YYF3 556 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 ADRA2BP18089 450 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 PPP4CP60510 307 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 AGBL2Q5U5Z8 902 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 PDIK1LQ8N165 341 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 SLC35G2Q8TBE7 412 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 LXNQ9BS40 222 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 NUP85Q9BW27 656 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 ARHGAP20Q9P2F6 1191 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 DIS3Q9Y2L1 958 aaKnown RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 CREB3O43889 395 aa12.32□□□□□ -0.44
VPS33A-201ENST00000267199 STK10O94804 968 aaKnown RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 SYF2O95926 243 aaKnown RBP12.32□□□□□ -0.44
VPS33A-201ENST00000267199 TNNC2P02585 160 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms