RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 NLRP4Q96MN2 994 aa13.97□□□□□ -0.17
SGCE-201ENST00000265735 FAM161BQ96MY7 647 aa13.97□□□□□ -0.17
SGCE-201ENST00000265735 RC3H2Q9HBD1 1191 aaKnown RBP13.97□□□□□ -0.17
SGCE-201ENST00000265735 MAN1B1Q9UKM7 699 aa13.97□□□□□ -0.17
SGCE-201ENST00000265735 C9IYK1 514 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 SLC26A4O43511 780 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 USO1O60763 962 aaKnown RBP13.96□□□□□ -0.17
SGCE-201ENST00000265735 CSDE1O75534 798 aaKnown RBP13.96□□□□□ -0.17
SGCE-201ENST00000265735 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 CYP11B2P19099 503 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 CLCN1P35523 988 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 GRIN2CQ14957 1233 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 FAM117BQ6P1L5 589 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 PADI6Q6TGC4 694 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 SLC24A5Q71RS6 500 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
SGCE-201ENST00000265735 DRC7Q8IY82 874 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 SPATA20Q8TB22 786 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 ZNF689Q96CS4 500 aaPredicted RBP13.96□□□□□ -0.17
SGCE-201ENST00000265735 MRFAP1L1Q96HT8 127 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 CCDC43Q96MW1 224 aaKnown RBP13.96□□□□□ -0.17
SGCE-201ENST00000265735 SCLT1Q96NL6 688 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 PNMA5Q96PV4 448 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 ADAM2Q99965 735 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 BHMT2Q9H2M3 363 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
SGCE-201ENST00000265735 C1orf112Q9NSG2 853 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
SGCE-201ENST00000265735 ARHGEF35A5YM69 484 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 E9PMD0 336 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 DGKIO75912 1065 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 UPP2O95045 317 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 EYA4O95677 639 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 FGFR4P22455 802 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 GLRA2P23416 452 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 UBA7P41226 1012 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 MYL5Q02045 173 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 GRB10Q13322 594 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 MORC3Q14149 939 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 E2F4Q16254 413 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 CT47A1Q5JQC4 288 aaPredicted RBP13.95□□□□□ -0.18
SGCE-201ENST00000265735 KCNK18Q7Z418 384 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 NPAS4Q8IUM7 802 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
SGCE-201ENST00000265735 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 CHST12Q9NRB3 414 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 DNM3Q9UQ16 869 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 LINC01553A4QN01 128 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.18
SGCE-201ENST00000265735 AFMP43652 599 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 PTENP60484 403 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 CAPSQ13938 189 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 GRAMD1CQ8IYS0 662 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 RASSF8Q8NHQ8 419 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 ELAC1Q9H777 363 aaKnown RBP13.95□□□□□ -0.18
SGCE-201ENST00000265735 MINDY3Q9H8M7 445 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
SGCE-201ENST00000265735 STAG3L1P0CL83 205 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
SGCE-201ENST00000265735 STAT6P42226 847 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 DPYDQ12882 1025 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 TFDP1Q14186 410 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
SGCE-201ENST00000265735 TMEM119Q4V9L6 283 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 RRAGBQ5VZM2 374 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 CABP7Q86V35 215 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 SPC24Q8NBT2 197 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 YME1L1Q96TA2 773 aa13.94□□□□□ -0.18
SGCE-201ENST00000265735 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
SGCE-201ENST00000265735 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
SGCE-201ENST00000265735 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
SGCE-201ENST00000265735 FNDC1Q4ZHG4 1894 aaPredicted RBP13.93□□□□□ -0.18
SGCE-201ENST00000265735 A0A0U1RQF3 1178 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 GTPBP6O43824 516 aaPredicted RBP13.93□□□□□ -0.18
SGCE-201ENST00000265735 LINC00271P0C7V0 271 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 PHKA2P46019 1235 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 ERVK-21P61565 698 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 NCAPHQ15003 741 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 MAEAQ7L5Y9 396 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 SPRED2Q7Z698 418 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 SYT2Q8N9I0 419 aaPredicted RBP13.93□□□□□ -0.18
SGCE-201ENST00000265735 CUEDC2Q9H467 287 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 MAGEF1Q9HAY2 307 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
SGCE-201ENST00000265735 STXBP5LQ9Y2K9 1186 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 NLRC5Q86WI3 1866 aa13.93□□□□□ -0.18
SGCE-201ENST00000265735 ADGRA3Q8IWK6 1321 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms