RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 UGGT1Q9NYU2 1555 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 FAM187AA6NFU0 413 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TAF4O00268 1085 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 CA4P22748 312 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ADORA1P30542 326 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 XKR9Q5GH70 373 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 RFX6Q8HWS3 928 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 PDIK1LQ8N165 341 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MAB21L3Q8N8X9 362 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 GRAMD1AQ96CP6 724 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 VPS50Q96JG6 964 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 RAD21L1Q9H4I0 556 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TRPC7Q9HCX4 862 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 APC2O95996 2303 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TCP11X1B4DZS4 312 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 RIMBP2O15034 1052 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PRPF3O43395 683 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 KCNA6P17658 529 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PPIDQ08752 370 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 TRIM67Q6ZTA4 783 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 SMYD4Q8IYR2 804 aaPredicted RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 PYROXD1Q8WU10 500 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 XPO6Q96QU8 1125 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 TRIM56Q9BRZ2 755 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 ALDH8A1Q9H2A2 487 aaPredicted RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 HESX1Q9UBX0 185 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ATP6V1HQ9UI12 483 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 M0QZ92 97 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TOM1O60784 492 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TMEM191BP0C7N4 346 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CCDC127Q96BQ5 260 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 SUGCTQ9HAC7 445 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PARVGQ9HBI0 331 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TIMMDC1Q9NPL8 285 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ZNF233A6NK53 670 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ZNF839A8K0R7 811 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 KRT6CP48668 564 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CYP4F22Q6NT55 531 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 SIRT2Q8IXJ6 389 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ZBTB8BQ8NAP8 495 aaPredicted RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 CDHR1Q96JP9 859 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ACCSQ96QU6 501 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 USP40Q9NVE5 1235 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 IQGAP1P46940 1657 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PCM1Q15154 2024 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 SFI1A8K8P3 1242 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 LRRN2O75325 713 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 MIS18BP1Q6P0N0 1132 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 GPIHBP1Q8IV16 184 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CCDC17Q96LX7 622 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 NACC1Q96RE7 527 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 HNRNPDLO14979 420 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 GFPT2O94808 682 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TRIM16O95361 564 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PMS1P54277 932 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 ARL4CP56559 192 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 NUP107P57740 925 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 EPAS1Q99814 870 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 NDST4Q9H3R1 872 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 GPHNQ9NQX3 736 aaPredicted RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 ASNA1O43681 348 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ITGA7Q13683 1181 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 FSCBQ5H9T9 825 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 WLSQ5T9L3 541 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TTBK2Q6IQ55 1244 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 FBXO11Q86XK2 927 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 UHMK1Q8TAS1 419 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 DCLRE1BQ9H816 532 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 DNAJC17Q9NVM6 304 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 EMC3Q9P0I2 261 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 RABGEF1Q9UJ41 708 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 RAB21Q9UL25 225 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TMOD1P28289 359 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PTPROQ16827 1216 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 LRRC8BQ6P9F7 803 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 IQCF2Q8IXL9 164 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ANKRD13CQ8N6S4 541 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 MAML1Q92585 1016 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 GLG1Q92896 1179 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 BHMT2Q9H2M3 363 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 HACD3Q9P035 362 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 FAM8A1Q9UBU6 413 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CCDC88AQ3V6T2 1871 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 KRT37O76014 449 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PTPREP23469 700 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ADRM1Q16186 407 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 RGS9BPQ6ZS82 235 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PODNQ7Z5L7 613 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 FAM161BQ96MY7 647 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PPCSQ9HAB8 311 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CCNL1Q9UK58 526 aaPredicted RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 L3MBTL1Q9Y468 752 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 AP4S1Q9Y587 144 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 IGSF1Q8N6C5 1336 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 XPO1O14980 1071 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 AGBL2Q5U5Z8 902 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CAPN9O14815 690 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms