RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 STK17AQ9UEE5 414 aa8□□□□□ -1.13
DEPDC1B-201ENST00000265036 SQORQ9Y6N5 450 aa8□□□□□ -1.13
DEPDC1B-201ENST00000265036 C9IYK1 514 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 ASAP2O43150 1006 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 EFCAB14O75071 495 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 AFF1P51825 1210 aaKnown RBP7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 SMAD3P84022 425 aaKnown RBP7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 GIT2Q14161 759 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 DSC3Q14574 896 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 MAPK6Q16659 721 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 EEF1DP3Q658K8 133 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 CDCA2Q69YH5 1023 aaPredicted RBP7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 SLC24A5Q71RS6 500 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 SV2BQ7L1I2 683 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 TAS1R3Q7RTX0 852 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 ARNTL2Q8WYA1 636 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 IPO9Q96P70 1041 aaKnown RBP7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 C17orf80Q9BSJ5 609 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 RGS18Q9NS28 235 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 CHMP5Q9NZZ3 219 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 ANKFY1Q9P2R3 1169 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 MSRAQ9UJ68 235 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 CITO14578 2027 aa7.99□□□□□ -1.13
DEPDC1B-201ENST00000265036 EPOPA6NHQ4 379 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TBKBP1A7MCY6 615 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TISP43B9A030 160 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 GADD45BO75293 160 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 NPTXRO95502 500 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PLS3P13797 630 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 OSTNP61366 133 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PRPF4BQ13523 1007 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 BTG3Q14201 252 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PPP2R5AQ15172 486 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ZC2HC1CQ53FD0 456 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ZNF697Q5TEC3 545 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ADALQ6DHV7 355 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CEP120Q8N960 986 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 HELQQ8TDG4 1101 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 GDPD5Q8WTR4 605 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ERCC4Q92889 916 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TRIM6Q9C030 488 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PRDM12Q9H4Q4 367 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ZNF576Q9H609 170 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PARVGQ9HBI0 331 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 FAM105AQ9NUU6 356 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CIZ1Q9ULV3 898 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 MORC2Q9Y6X9 1032 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TDRD15B5MCY1 1934 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 LINC01553A4QN01 128 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 K7ERI5 159 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 AKAP5P24588 427 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 SARSP49591 514 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CASP5P51878 434 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ASIC1P78348 528 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CDC42EP1Q00587 391 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 GRIN2CQ14957 1233 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 RAB30Q15771 203 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 SEZ6Q53EL9 994 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CLLU1OSQ5K130 101 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 UBXN11Q5T124 520 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 NOTUMQ6P988 496 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ZBTB33Q86T24 672 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ECHDC2Q86YB7 292 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 FAM178BQ8IXR5 827 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 IQUBQ8NA54 791 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 MRPS27Q92552 414 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 DNAJC19Q96DA6 116 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 BICD1Q96G01 975 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 RAD9AQ99638 391 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TARS2Q9BW92 718 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CCDC113Q9H0I3 377 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 GBP3Q9H0R5 595 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 RNF39Q9H2S5 420 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 DACT1Q9NYF0 836 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 LARSQ9P2J5 1176 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 ARHGAP28Q9P2N2 729 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PCDHB7Q9Y5E2 793 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PCDHB2Q9Y5E7 798 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PCDHA11Q9Y5I1 949 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 TTC28Q96AY4 2481 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 CNTNAP2Q9UHC6 1331 aa7.98□□□□□ -1.13
DEPDC1B-201ENST00000265036 PRR29P0C7W0 189 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 SYKP43405 635 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 TAP1Q03518 808 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 KCNA1Q09470 495 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 CUL4BQ13620 913 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 TMEM161BQ8NDZ6 487 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 PHOSPHO2Q8TCD6 241 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 ZBTB45Q96K62 511 aaPredicted RBP7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 C2orf40Q9H1Z8 148 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 CXCL16Q9H2A7 254 aa7.97□□□□□ -1.13
DEPDC1B-201ENST00000265036 PDZD7Q9H5P4 517 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms