RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 A0A087WUV0 522 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 AGBL3Q8NEM8 1001 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 PYROXD1Q8WU10 500 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 FHOD1Q9Y613 1164 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 MSH4O15457 936 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 CYP26A1O43174 497 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 SLC9A1P19634 815 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 SNRPFP62306 86 aaKnown RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 DNAJC7Q99615 494 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 TOPORSQ9NS56 1045 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 MON2Q7Z3U7 1717 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 DHX34Q14147 1143 aaKnown RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 BBS9Q3SYG4 887 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 ZC2HC1CQ53FD0 456 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 CDKAL1Q5VV42 579 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 OR6B3Q8NGW1 331 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.88■□□□□ 0.453e-9■■■■■ 80.2
PHRF1-201ENST00000264555 OTUD5Q96G74 571 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 SPATA33Q96N06 139 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 MMP19Q99542 508 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 MAFGO15525 162 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 EVI5O60447 810 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 CYP11B2P19099 503 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 PMS2P54278 862 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 ZKSCAN8Q15776 578 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 GALCP54803 685 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 ITKQ08881 620 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 NT5DC1Q5TFE4 455 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 TTI2Q6NXR4 508 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 RHOT1Q8IXI2 618 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 HSPH1Q92598 858 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 RNPC3Q96LT9 517 aaKnown RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 ZCCHC17Q9NP64 241 aaKnown RBP17.88■□□□□ 0.45
PHRF1-201ENST00000264555 ASNSD1Q9NWL6 643 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 PLAGL2Q9UPG8 496 aa17.88■□□□□ 0.45
PHRF1-201ENST00000264555 ZBED1O96006 694 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 STAT5BP51692 787 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 RNASELQ05823 741 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 MKRN3Q13064 507 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 XRRA1Q6P2D8 792 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 ANKS1AQ92625 1134 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 VIPAS39Q9H9C1 493 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 L2HGDHQ9H9P8 463 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 ARHGEF37A1IGU5 675 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 TFDP2Q14188 446 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 DUOXA2Q1HG44 320 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 DNAJC17Q9NVM6 304 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 CCDC160A6NGH7 325 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 ABL1P00519 1130 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 PDCLQ13371 301 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 MYOZ2Q9NPC6 264 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 KCNH7Q9NS40 1196 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 CLTAP09496 248 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 SRGAP2BP0DMP2 458 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 SARSP49591 514 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 HNRNPH2P55795 449 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 KLHDC7AQ5VTJ3 777 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 BZW1Q7L1Q6 419 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 SLC35G2Q8TBE7 412 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 GMCL1Q96IK5 515 aa17.87■□□□□ 0.45
PHRF1-201ENST00000264555 NGRNQ9NPE2 291 aaKnown RBP17.87■□□□□ 0.45
PHRF1-201ENST00000264555 SLC8A1P32418 973 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 SNRNP35Q16560 246 aaKnown RBP17.86■□□□□ 0.45
PHRF1-201ENST00000264555 SPOUT1Q5T280 376 aaKnown RBP17.86■□□□□ 0.45
PHRF1-201ENST00000264555 TTC39CQ8N584 583 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 GINM1Q9NU53 330 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 CCDC137Q6PK04 289 aaKnown RBP17.86■□□□□ 0.45
PHRF1-201ENST00000264555 PCGF5Q86SE9 256 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-201ENST00000264555 BCAP29Q9UHQ4 241 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 ZNF18P17022 549 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 CDO1Q16878 200 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 AGBL1Q96MI9 1066 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 SH2D3AQ9BRG2 576 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 SAYSD1Q9NPB0 183 aa17.86■□□□□ 0.45
PHRF1-201ENST00000264555 RSRC2Q7L4I2 434 aaKnown RBP17.86■□□□□ 0.45
PHRF1-201ENST00000264555 P4HA2O15460 535 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 SREBF1P36956 1147 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 FIGNQ5HY92 759 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 RNF25Q96BH1 459 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 SCYL1Q96KG9 808 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 PRMT6Q96LA8 375 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 RPS12P25398 132 aaKnown RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 PPM1FP49593 454 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 ERVK-24P63145 666 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 EARS2Q5JPH6 523 aaKnown RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 MOV10L1Q9BXT6 1211 aaKnown RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 UVRAGQ9P2Y5 699 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 SLC1A1P43005 524 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 ARL4CP56559 192 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 FASTKD5Q7L8L6 764 aaKnown RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 PARVAQ9NVD7 372 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 AMACRQ9UHK6 382 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 ASB14A6NK59 587 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 CLNS1AP54105 237 aaKnown RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 MS4A14Q96JA4 679 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 KRT7P08729 469 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms