RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 A6NNZ2 444 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 HIP1RO75146 1068 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 LMNB1P20700 586 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 SSTR3P32745 418 aaPredicted RBP17.85■□□□□ 0.45
ZNF541-201ENST00000263351 ABCB5Q2M3G0 1257 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 TUBB8Q3ZCM7 444 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 SLC47A2Q86VL8 602 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 C1orf54Q8WWF1 131 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 ATG4AQ8WYN0 398 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 ZNF317Q96PQ6 595 aaPredicted RBP17.85■□□□□ 0.45
ZNF541-201ENST00000263351 AGPAT1Q99943 283 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 GPRC5CQ9NQ84 441 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 OLFML3Q9NRN5 406 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 ATXN2Q99700 1313 aaKnown RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 RGL2O15211 777 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 ACSL3O95573 720 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 VPS41P49754 854 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 MTMR3Q13615 1198 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 DCAF4Q8WV16 495 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 DHX38Q92620 1227 aaKnown RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 CHMP6Q96FZ7 201 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 HERPUD2Q9BSE4 406 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 KIFC3Q9BVG8 833 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 FAM129AQ9BZQ8 928 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 ABCF3Q9NUQ8 709 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 PSMD10O75832 226 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 DLATP10515 647 aaKnown RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 BMP3P12645 472 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 BFSP1Q12934 665 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 GKAP1Q5VSY0 366 aaPredicted RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 DENND2CQ68D51 928 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 CCDC137Q6PK04 289 aaKnown RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 NOP9Q86U38 636 aaKnown RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 NEK9Q8TD19 979 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 FAM20AQ96MK3 541 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 CRAMP1Q96RY5 1269 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 PABPC3Q9H361 631 aaKnown RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 TOPORSQ9NS56 1045 aaPredicted RBP17.84■□□□□ 0.45
ZNF541-201ENST00000263351 AGAP1Q9UPQ3 857 aa17.84■□□□□ 0.45
ZNF541-201ENST00000263351 ZNF831Q5JPB2 1677 aa17.83■□□□□ 0.45
ZNF541-201ENST00000263351 K7ENM7 598 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 CYP26A1O43174 497 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 GAS7O60861 476 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 C1orf220Q5T0J3 134 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 LXNQ9BS40 222 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 NYAP2Q9P242 653 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 USP21Q9UK80 565 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 FRMD4BQ9Y2L6 1034 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 C5orf60A6NFR6 353 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 VIMP08670 466 aaKnown RBP17.83■□□□□ 0.44
ZNF541-201ENST00000263351 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
ZNF541-201ENST00000263351 CHKAP35790 457 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 MAP2K2P36507 400 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 MKL1Q969V6 931 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 POLR3CQ9BUI4 534 aaPredicted RBP17.83■□□□□ 0.44
ZNF541-201ENST00000263351 GLIS2Q9BZE0 524 aaPredicted RBP17.83■□□□□ 0.44
ZNF541-201ENST00000263351 CARD9Q9H257 536 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 USP20Q9Y2K6 914 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 PCDHA3Q9Y5H8 950 aa17.83■□□□□ 0.44
ZNF541-201ENST00000263351 O00370 1275 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 GH1P01241 217 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 RARAP10276 462 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 CHRNB2P17787 502 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 DGKZQ13574 1117 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 ACCSLQ4AC99 568 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 HS2ST1Q7LGA3 356 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 PARP9Q8IXQ6 854 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.82■□□□□ 0.44
ZNF541-201ENST00000263351 ANKRD62A6NC57 917 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 RGS16O15492 202 aaPredicted RBP17.82■□□□□ 0.44
ZNF541-201ENST00000263351 CLDN3O15551 220 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 PAEPP09466 180 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 NPEPPSP55786 919 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 SOX10P56693 466 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 MAP2K1Q02750 393 aaPredicted RBP17.82■□□□□ 0.44
ZNF541-201ENST00000263351 HIBCHQ6NVY1 386 aaPredicted RBP17.82■□□□□ 0.44
ZNF541-201ENST00000263351 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
ZNF541-201ENST00000263351 SP8Q8IXZ3 490 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 CCDC127Q96BQ5 260 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 NAP1L4Q99733 375 aaKnown RBP17.82■□□□□ 0.44
ZNF541-201ENST00000263351 ADAM33Q9BZ11 813 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 RAB17Q9H0T7 212 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 DMAC2Q9NW81 257 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 PI4KBQ9UBF8 816 aa17.82■□□□□ 0.44
ZNF541-201ENST00000263351 SCN9AQ15858 1988 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 GTPBP10A4D1E9 387 aaKnown RBP17.81■□□□□ 0.44
ZNF541-201ENST00000263351 TBX3O15119 743 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 CIITAP33076 1130 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 PPP1R7Q15435 360 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 MOXD1Q6UVY6 613 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 TBC1D1Q86TI0 1168 aaPredicted RBP17.81■□□□□ 0.44
ZNF541-201ENST00000263351 TAX1BP1Q86VP1 789 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 CCDC105Q8IYK2 499 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 EIF1ADQ8N9N8 165 aaKnown RBP17.81■□□□□ 0.44
ZNF541-201ENST00000263351 IL31RAQ8NI17 732 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 SEMA4DQ92854 862 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 ZNF622Q969S3 477 aaKnown RBP eCLIP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms