RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 IQCDQ96DY2 449 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 PANX2Q96RD6 677 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 SAGE1Q9NXZ1 904 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 EVPLQ92817 2033 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 EDN1P05305 212 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 MYL3P08590 195 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 SMIM10L2AP0DMW4 78 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 SMIM10L2BP0DMW5 78 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 ELNP15502 786 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 PSEN2P49810 448 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 LIG4P49917 911 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 MCCD1P59942 119 aaPredicted RBP25■■□□□ 1.59
SMARCB1-201ENST00000263121 TMEM139Q8IV31 216 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 ZBTB8OSQ8IWT0 167 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 KIAA1524Q8TCG1 905 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 CCDC51Q96ER9 411 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 FBXL18Q96ME1 805 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 CAPN11Q9UMQ6 739 aa25■■□□□ 1.59
SMARCB1-201ENST00000263121 NRCAMQ92823 1304 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 TTC26A0AVF1 554 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 POU5F1BQ06416 359 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 BFSP1Q12934 665 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 TCERG1LQ5VWI1 586 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 INTS8Q75QN2 995 aaKnown RBP24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 LMBR1Q8WVP7 490 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 POMGNT1Q8WZA1 660 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 PCMTD1Q96MG8 357 aaPredicted RBP24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 NFKBIZQ9BYH8 718 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 SETD4Q9NVD3 440 aa24.99■■□□□ 1.59
SMARCB1-201ENST00000263121 A0A1W2PQJ5 194 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 MYADML2A6NDP7 307 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 MSCO60682 206 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 TRIM21P19474 475 aaKnown RBP24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 TMOD1P28289 359 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 PURAQ00577 322 aaKnown RBP24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 RDH13Q8NBN7 331 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 ERO1AQ96HE7 468 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 NLRP4Q96MN2 994 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 KATNAL1Q9BW62 490 aa24.98■■□□□ 1.59
SMARCB1-201ENST00000263121 NRDCO43847 1150 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 KPNA6O60684 536 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 C6orf222P0C671 652 aaPredicted RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 PRKAR2AP13861 404 aaKnown RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 PTENP60484 403 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 ZPBP2Q6X784 338 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 TARS2Q9BW92 718 aaKnown RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 USP20Q9Y2K6 914 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 GOLGA8IPA6NC78 632 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 GOLGA8JA6NMD2 632 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 FKTNO75072 461 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 HMGCRP04035 888 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 ADRB2P07550 413 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 RARBP10826 455 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 KRT13P13646 458 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 FECHP22830 423 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 CCND3P30281 292 aaPredicted RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 SNRNP35Q16560 246 aaKnown RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 MAP3K21Q5TCX8 1036 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 IFNLR1Q8IU57 520 aaPredicted RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 SAAL1Q96ER3 474 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 MMRN2Q9H8L6 949 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 ABHD10Q9NUJ1 306 aa24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 LUC7L2Q9Y383 392 aaKnown RBP24.97■■□□□ 1.59
SMARCB1-201ENST00000263121 KAT6AQ92794 2004 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 GTPBP10A4D1E9 387 aaKnown RBP24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 MBLAC1A4D2B0 266 aaPredicted RBP24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 KIAA0391O15091 583 aaKnown RBP24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 ZNF500O60304 480 aaPredicted RBP24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 PRKCBP05771 671 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 KRT9P35527 623 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 ADAM17P78536 824 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 MAPK6Q16659 721 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 SLFN12LQ6IEE8 588 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 CBWD2Q8IUF1 395 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 GPD1LQ8N335 351 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 PXYLP1Q8TE99 480 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 BAG1Q99933 345 aaPredicted RBP24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 MRPL4Q9BYD3 311 aaKnown RBP24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 FZD8Q9H461 694 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 IFT122Q9HBG6 1241 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 AKT3Q9Y243 479 aa24.96■■□□□ 1.59
SMARCB1-201ENST00000263121 EPHB6O15197 1021 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 VAMP7P51809 220 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 NFRKBQ6P4R8 1299 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 KIAA0319LQ8IZA0 1049 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 ZNF296Q8WUU4 475 aaPredicted RBP24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 MAP7D2Q96T17 732 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 DNAJC7Q99615 494 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 HAPLN2Q9GZV7 340 aa24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 FAM207AQ9NSI2 230 aaPredicted RBP24.95■■□□□ 1.58
SMARCB1-201ENST00000263121 STX10O60499 249 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ADAMTS4O75173 837 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 TRIM49P0CI25 452 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 TRIM49CP0CI26 452 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 PHKA2P46019 1235 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 KCNJ6P48051 423 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 FMO5P49326 533 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 MBTD1Q05BQ5 628 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 GNASQ5JWF2 1037 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 NEK11Q8NG66 645 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms