RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ANP32DO95626 131 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 MYBL1P10243 752 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 MORF4L2Q15014 288 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 RABGAP1LQ5R372 815 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 PDXDC1Q6P996 788 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 SNX12Q9UMY4 172 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 KDM1AO60341 852 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 XPAP23025 273 aaPredicted RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 ELF1P32519 619 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 ZIM3Q96PE6 472 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 ZNF229Q9UJW7 825 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 KRT38O76015 456 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 KCNA3P22001 575 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 EFTUD2Q15029 972 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMG6-201ENST00000263073 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 EDEM3Q9BZQ6 932 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 FAM49AQ9H0Q0 323 aaPredicted RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 GRID2IPA4D2P6 1211 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 CHEK2O96017 543 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 KPNA2P52292 529 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 FRA10AC1Q70Z53 315 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 ADNPQ9H2P0 1102 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 SNX5Q9Y5X3 404 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 TAC1P20366 129 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 NME3Q13232 169 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 GIPC2Q8TF65 315 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 SH3GL3Q99963 347 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 KIF17Q9P2E2 1029 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 SUN2Q9UH99 717 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 CYP26A1O43174 497 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 VAMP7P51809 220 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 ANO5Q75V66 913 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 DPP9Q86TI2 863 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 DDIASQ8IXT1 998 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 TMA16Q96EY4 203 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 FAM8A1Q9UBU6 413 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 UBE4BO95155 1302 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 CLDN3O15551 220 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 KIAA2013Q8IYS2 634 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 TRABDQ9H4I3 376 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 SLC40A1Q9NP59 571 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 RHBDL2Q9NX52 303 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 CFAP73A6NFT4 308 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 M0QYV0 167 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 RAD51CO43502 376 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 PSAPP07602 524 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 GNA15P30679 374 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 HNRNPH1P31943 449 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 CHRNA3P32297 505 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 RBM41Q96IZ5 413 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 CDCA7Q9BWT1 371 aaPredicted RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 FSD1LQ9BXM9 530 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 DGKIO75912 1065 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 LSP1P33241 339 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
SMG6-201ENST00000263073 DRP2Q13474 957 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 ERP27Q96DN0 273 aa12.81□□□□□ -0.36
SMG6-201ENST00000263073 A0A0G2JLW4 131 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 KCTD2Q14681 263 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 CPA5Q8WXQ8 436 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 ASCC2Q9H1I8 757 aaPredicted RBP12.8□□□□□ -0.36
SMG6-201ENST00000263073 AFF4Q9UHB7 1163 aaKnown RBP12.8□□□□□ -0.36
SMG6-201ENST00000263073 USP21Q9UK80 565 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 ATP9BO43861 1147 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 CCNI2Q6ZMN8 369 aaPredicted RBP12.8□□□□□ -0.36
SMG6-201ENST00000263073 NUP93Q8N1F7 819 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 BBS5Q8N3I7 341 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 SLC35G2Q8TBE7 412 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 FBXO2Q9UK22 296 aaPredicted RBP12.8□□□□□ -0.36
SMG6-201ENST00000263073 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 P3H1Q32P28 736 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
SMG6-201ENST00000263073 FAM81BQ96LP2 452 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
SMG6-201ENST00000263073 EMSYQ7Z589 1322 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 METP08581 1390 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 GTPBP10A4D1E9 387 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms