RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 SMG8Q8ND04 991 aaKnown RBP20.37■□□□□ 0.85
COPE-201ENST00000262812 RASSF8Q8NHQ8 419 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 ATXN2LQ8WWM7 1075 aaKnown RBP20.37■□□□□ 0.85
COPE-201ENST00000262812 HLA-CQ95604 372 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 CALML4Q96GE6 196 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 APOL6Q9BWW8 343 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 LMAN2LQ9H0V9 348 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 CSRNP2Q9H175 543 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 C2orf40Q9H1Z8 148 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
COPE-201ENST00000262812 HES2Q9Y543 173 aa20.37■□□□□ 0.85
COPE-201ENST00000262812 PRRC2BQ5JSZ5 2229 aaKnown RBP20.37■□□□□ 0.85
COPE-201ENST00000262812 COL4A4P53420 1690 aaPredicted RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 CCDC169A6NNP5 214 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 PLA2G4BP0C869 781 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 ITGA4P13612 1032 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 PEX3P56589 373 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 MRPS5P82675 430 aaKnown RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 RNASELQ05823 741 aaKnown RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 CAMK1Q14012 370 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 DHX8Q14562 1220 aaKnown RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 TIGD5Q53EQ6 642 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 CDCA2Q69YH5 1023 aaPredicted RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 KCNT2Q6UVM3 1135 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 EP400NLQ6ZTU2 488 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 C1orf186Q6ZWK4 172 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 MICAL1Q8TDZ2 1067 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 ZNF558Q96NG5 402 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 USP28Q96RU2 1077 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 MRPL9Q9BYD2 267 aaKnown RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 TRIM6Q9C030 488 aaPredicted RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 GBP3Q9H0R5 595 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 RNF39Q9H2S5 420 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 FZD8Q9H461 694 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 NSUN3Q9H649 340 aaKnown RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 IGFLR1Q9H665 355 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 PRMT7Q9NVM4 692 aaPredicted RBP20.36■□□□□ 0.85
COPE-201ENST00000262812 IPPQ9Y573 584 aa20.36■□□□□ 0.85
COPE-201ENST00000262812 ARID2Q68CP9 1835 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 NPHP3-ACAD11A0A0J9YXS1 232 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 TTLL13PA6NNM8 815 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 NT5C1B-RDH14C9J2C7 533 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 NPTXRO95502 500 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 NCLP19338 710 aaKnown RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 IRS1P35568 1242 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 AFF1P51825 1210 aaKnown RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 PRPF4BQ13523 1007 aaKnown RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 KARSQ15046 597 aaKnown RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 MAPK6Q16659 721 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 FOXD4L6Q3SYB3 417 aaPredicted RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 TMEM119Q4V9L6 283 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 FOXD4L3Q6VB84 417 aaPredicted RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 DAW1Q8N136 415 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 SYT2Q8N9I0 419 aaPredicted RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 CCDC51Q96ER9 411 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 EPSTI1Q96J88 318 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 CLIC6Q96NY7 704 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 ASB2Q96Q27 587 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 RSAD1Q9HA92 442 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 TFIP11Q9UBB9 837 aaKnown RBP20.35■□□□□ 0.85
COPE-201ENST00000262812 COG5Q9UP83 839 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 PCDHGC5Q9Y5F6 944 aa20.35■□□□□ 0.85
COPE-201ENST00000262812 A0A1B0GUA9 196 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 PRKCBP05771 671 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 BCAR1P56945 870 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 SLC27A1Q6PCB7 646 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 PPP4R3CPQ6ZMV5 832 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 USP49Q70CQ1 688 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 CNNM3Q8NE01 707 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 URGCPQ8TCY9 931 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 TBC1D13Q9NVG8 400 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 SPG21Q9NZD8 308 aa20.34■□□□□ 0.85
COPE-201ENST00000262812 FBXO2Q9UK22 296 aaPredicted RBP20.34■□□□□ 0.85
COPE-201ENST00000262812 DLL1O00548 723 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 ZC3H11AO75152 810 aaKnown RBP eCLIP20.33■□□□□ 0.85
COPE-201ENST00000262812 POMCP01189 267 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 PLCG1P19174 1290 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 AKAP5P24588 427 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 NPTX2P47972 431 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 ALDH7A1P49419 539 aaKnown RBP20.33■□□□□ 0.85
COPE-201ENST00000262812 SLC12A3P55017 1021 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 CACNB1Q02641 598 aaPredicted RBP20.33■□□□□ 0.85
COPE-201ENST00000262812 TJAP1Q5JTD0 557 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 ZNF280BQ86YH2 543 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 KCTD17Q8N5Z5 321 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 PRIMPOLQ96LW4 560 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 DRC1Q96MC2 740 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 NXF3Q9H4D5 531 aaKnown RBP20.33■□□□□ 0.85
COPE-201ENST00000262812 NRDE2Q9H7Z3 1164 aa20.33■□□□□ 0.85
COPE-201ENST00000262812 PUF60Q9UHX1 559 aaKnown RBP20.33■□□□□ 0.85
COPE-201ENST00000262812 SRPRBQ9Y5M8 271 aaKnown RBP20.33■□□□□ 0.85
COPE-201ENST00000262812 CNTNAP2Q9UHC6 1331 aa20.32■□□□□ 0.84
COPE-201ENST00000262812 K7ERI5 159 aa20.32■□□□□ 0.84
COPE-201ENST00000262812 ACKR2O00590 384 aa20.32■□□□□ 0.84
COPE-201ENST00000262812 SLC26A4O43511 780 aa20.32■□□□□ 0.84
COPE-201ENST00000262812 GUCY2CP25092 1073 aa20.32■□□□□ 0.84
COPE-201ENST00000262812 GTF2F1P35269 517 aaKnown RBP eCLIP20.32■□□□□ 0.84
COPE-201ENST00000262812 KCNQ1P51787 676 aa20.32■□□□□ 0.84
COPE-201ENST00000262812 EFNA5P52803 228 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms