RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 SP2Q02086 613 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 GPM6BQ13491 265 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 COL19A1Q14993 1142 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 TERF2Q15554 542 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 WHAMMP3Q1A5X7 153 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 TCTN1Q2MV58 587 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 PCNX4Q63HM2 1172 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 FAM117BQ6P1L5 589 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 FOXR2Q6PJQ5 311 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 SMYD4Q8IYR2 804 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 BANK1Q8NDB2 785 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 OR8K1Q8NGG5 319 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 HNRNPLLQ8WVV9 542 aaKnown RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 WNT8BQ93098 351 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 C7orf25Q9BPX7 421 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 C17orf80Q9BSJ5 609 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 C11orf84Q9BUA3 381 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 RNPEPQ9H4A4 650 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 MRPL44Q9H9J2 332 aaKnown RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 ARFGAP3Q9NP61 516 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 RAPGEFL1Q9UHV5 662 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 CHD7Q9P2D1 2997 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 C5orf67F2Z3F1 127 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 CASP1P29466 404 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 UBXN1Q04323 297 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 KARSQ15046 597 aaKnown RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 NAALADL2Q58DX5 795 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 TEX35Q5T0J7 233 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 HEATR3Q7Z4Q2 680 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 TMCO2Q7Z6W1 182 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 NEK8Q86SG6 692 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 FIBCD1Q8N539 461 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 PIGSQ96S52 555 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 POP1Q99575 1024 aaKnown RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 DNAJC7Q99615 494 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 GPR20Q99678 358 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 RAB34Q9BZG1 259 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 HAUS4Q9H6D7 363 aa10.59□□□□□ -0.71
TTC39A-201ENST00000262675 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-201ENST00000262675 TREHO43280 583 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 KLRC4O43908 158 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 ERLIN1O75477 346 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 FGFR1OPO95684 399 aaKnown RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CCNE1P24864 410 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 KRT9P35527 623 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CCT6AP40227 531 aaKnown RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 NAPAP54920 295 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 KRT83P78385 493 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 INF2Q27J81 1249 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 FIGNQ5HY92 759 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 PPP1R18Q6NYC8 613 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 IL31RAQ8NI17 732 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CPLX3Q8WVH0 158 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 PPP2R3CQ969Q6 453 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 GPRASP2Q96D09 838 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CALML4Q96GE6 196 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 NAPGQ99747 312 aaPredicted RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 DESI2Q9BSY9 194 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 PLVAPQ9BX97 442 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 IFIH1Q9BYX4 1025 aaKnown RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 GBP3Q9H0R5 595 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 STK17AQ9UEE5 414 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CAPN11Q9UMQ6 739 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 LUC7L2Q9Y383 392 aaKnown RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 SQORQ9Y6N5 450 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 MAFGO15525 162 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CYTH3O43739 400 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 ADAM17P78536 824 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CDK17Q00537 523 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 HIC1Q14526 733 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CC2D1AQ6P1N0 951 aaPredicted RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 SPRED2Q7Z698 418 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 CABP7Q86V35 215 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 LRRN4CLQ8ND94 238 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 ZNF507Q8TCN5 953 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 STAMQ92783 540 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 VPS16Q9H269 839 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 EHMT1Q9H9B1 1298 aa10.58□□□□□ -0.72
TTC39A-201ENST00000262675 EPN1Q9Y6I3 576 aaPredicted RBP10.58□□□□□ -0.72
TTC39A-201ENST00000262675 PVALEFA0A1B0GWK0 134 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 SMCO2A6NFE2 343 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 SLC26A4O43511 780 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
TTC39A-201ENST00000262675 ARHGAP4P98171 946 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 GPS2Q13227 327 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 MTF1Q14872 753 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 PTPN21Q16825 1174 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 ZNF569Q5MCW4 686 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 TYW1BQ6NUM6 668 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 CCDC170Q8IYT3 715 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 MSANTD4Q8NCY6 345 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 RPGRIP1Q96KN7 1286 aa10.57□□□□□ -0.72
TTC39A-201ENST00000262675 NAP1L4Q99733 375 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms