RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SQORQ9Y6N5 450 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 LOXHD1Q8IVV2 1947 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 NPHP3-ACAD11A0A0J9YXS1 232 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 ASAP2O43150 1006 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 NR1I2O75469 434 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 FGBP02675 491 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 DARSP14868 501 aaKnown RBP12.8□□□□□ -0.36
PFDN1-201ENST00000261813 EIF4BP23588 611 aaKnown RBP12.8□□□□□ -0.36
PFDN1-201ENST00000261813 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 CD52P31358 61 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 STAT6P42226 847 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 MAPK7Q13164 816 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
PFDN1-201ENST00000261813 CAPSQ13938 189 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 DHX8Q14562 1220 aaKnown RBP12.8□□□□□ -0.36
PFDN1-201ENST00000261813 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 CNKSR3Q6P9H4 555 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 OTOP2Q7RTS6 562 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 ZNF410Q86VK4 478 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 FAM228AQ86W67 206 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 CEP57L1Q8IYX8 460 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 DAW1Q8N136 415 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 SCLT1Q96NL6 688 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 IFIH1Q9BYX4 1025 aaKnown RBP12.8□□□□□ -0.36
PFDN1-201ENST00000261813 LRRC27Q9C0I9 530 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 TNMDQ9H2S6 317 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 PADI3Q9ULW8 664 aa12.8□□□□□ -0.36
PFDN1-201ENST00000261813 TET1Q8NFU7 2136 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
PFDN1-201ENST00000261813 HIP1RO75146 1068 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 CSDE1O75534 798 aaKnown RBP12.79□□□□□ -0.36
PFDN1-201ENST00000261813 RPS6KA5O75582 802 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 MYL1P05976 194 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 SRGAP2CP0DJJ0 459 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 FGFR4P22455 802 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 CDC42EP1Q00587 391 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 MXD4Q14582 209 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-201ENST00000261813 RASIP1Q5U651 963 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 FAM109BQ6ICB4 259 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-201ENST00000261813 GPBP1Q86WP2 473 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 USP38Q8NB14 1042 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 CNNM3Q8NE01 707 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 SEPT8Q92599 483 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 DHX58Q96C10 678 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 GCOM2Q9BZD3 368 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-201ENST00000261813 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 GOLPH3LQ9H4A5 285 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
PFDN1-201ENST00000261813 CXXC1Q9P0U4 656 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-201ENST00000261813 ACTN1P12814 892 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 AMPD3Q01432 767 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 PAK2Q13177 524 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 KRBA2Q6ZNG9 492 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
PFDN1-201ENST00000261813 KIFAP3Q92845 792 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 APBB2Q92870 758 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 REEP2Q9BRK0 252 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 TIPINQ9BVW5 301 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 KCND2Q9NZV8 630 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 ST3GAL5Q9UNP4 418 aa12.78□□□□□ -0.36
PFDN1-201ENST00000261813 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.77□□□□□ -0.37
PFDN1-201ENST00000261813 MYMKA6NI61 221 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 BAIAP3O94812 1187 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 PHKA2P46019 1235 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 PTENP60484 403 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 POU5F1BQ06416 359 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.37
PFDN1-201ENST00000261813 GIT2Q14161 759 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 IKBKEQ14164 716 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 TFDP1Q14186 410 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 SV2BQ7L1I2 683 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 ADGRA3Q8IWK6 1321 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 RNPC3Q96LT9 517 aaKnown RBP12.77□□□□□ -0.37
PFDN1-201ENST00000261813 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
PFDN1-201ENST00000261813 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
PFDN1-201ENST00000261813 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 GPR182O15218 404 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 MGEA5O60502 916 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 NAMPTP43490 491 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
PFDN1-201ENST00000261813 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 ZNF697Q5TEC3 545 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 CDCA2Q69YH5 1023 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-201ENST00000261813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms