RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 BTBD8Q5XKL5 378 aa14.91□□□□□ -0.02
CDH1-201ENST00000261769 TAB3Q8N5C8 712 aaPredicted RBP14.91□□□□□ -0.02
CDH1-201ENST00000261769 GPR182O15218 404 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 S100BP04271 92 aaPredicted RBP14.9□□□□□ -0.02
CDH1-201ENST00000261769 PGK2P07205 417 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 C7orf25Q9BPX7 421 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 SYNPO2Q9UMS6 1093 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 ECEL1O95672 775 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 CTNNA1P35221 906 aaKnown RBP14.9□□□□□ -0.02
CDH1-201ENST00000261769 THPOP40225 353 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 NLRP11P59045 1033 aaKnown RBP14.9□□□□□ -0.02
CDH1-201ENST00000261769 PPIL2Q13356 520 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 DEFB115Q30KQ5 88 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 RBM41Q96IZ5 413 aaKnown RBP14.9□□□□□ -0.02
CDH1-201ENST00000261769 SH2D3AQ9BRG2 576 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 STARD7Q9NQZ5 370 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 HSPBP1Q9NZL4 362 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 PCDHB7Q9Y5E2 793 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 EFCAB8A8MWE9 144 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 MUTP22033 750 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 SHMT1P34896 483 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 TMEM62Q0P6H9 643 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 NOGQ13253 232 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 PPP6R3Q5H9R7 873 aaPredicted RBP14.9□□□□□ -0.02
CDH1-201ENST00000261769 FAM117BQ6P1L5 589 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 DCP1BQ8IZD4 617 aaKnown RBP14.9□□□□□ -0.02
CDH1-201ENST00000261769 REEP2Q9BRK0 252 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 PITPNM2Q9BZ72 1349 aa14.9□□□□□ -0.02
CDH1-201ENST00000261769 MIF4GDA9UHW6 222 aaKnown RBP14.89□□□□□ -0.03
CDH1-201ENST00000261769 PCSK1P29120 753 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 GPC5P78333 572 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 PDE1BQ01064 536 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 PLA2G4FQ68DD2 849 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 PHLDB2Q86SQ0 1253 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 FAM114A2Q9NRY5 505 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 CPP00450 1065 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 CYP11B2P19099 503 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 ADORA2BP29275 332 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 PSMC1P62191 440 aaKnown RBP14.89□□□□□ -0.03
CDH1-201ENST00000261769 RAD51Q06609 339 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
CDH1-201ENST00000261769 TTC13Q8NBP0 860 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 ANAPC7Q9UJX3 599 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 SNX9Q9Y5X1 595 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 LRRC71Q8N4P6 559 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 EDEM3Q9BZQ6 932 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 FAM205CA6NFA0 338 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 SREBF1P36956 1147 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 BRD3Q15059 726 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 SGSM1Q2NKQ1 1148 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 GDAP1Q8TB36 358 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 ABHD16BQ9H3Z7 469 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 SENP2Q9HC62 589 aa14.89□□□□□ -0.03
CDH1-201ENST00000261769 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 ATP1A3P13637 1013 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 THOC5Q13769 683 aaKnown RBP14.88□□□□□ -0.03
CDH1-201ENST00000261769 RPS6KA2Q15349 733 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 SCYL1Q96KG9 808 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 BPIFA3Q9BQP9 254 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 C11orf70Q9BRQ4 267 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 UBN1Q9NPG3 1134 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 CDC23Q9UJX2 597 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 MFAP3LO75121 409 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 TRPA1O75762 1119 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 TJP3O95049 919 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 ZRANB2O95218 330 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDH1-201ENST00000261769 DRAP1Q14919 205 aaPredicted RBP14.88□□□□□ -0.03
CDH1-201ENST00000261769 SLC35F6Q8N357 371 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDH1-201ENST00000261769 SEPT8Q92599 483 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 TMEM169Q96HH4 297 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
CDH1-201ENST00000261769 INHBAP08476 426 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 CDK17Q00537 523 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 DCAF4L1Q3SXM0 396 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 SV2CQ496J9 727 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 AFAP1L1Q8TED9 768 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 ZWILCHQ9H900 591 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 TUBE1Q9UJT0 475 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 LSM7Q9UK45 103 aaKnown RBP14.88□□□□□ -0.03
CDH1-201ENST00000261769 MYBL1P10243 752 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 GUCY2FP51841 1108 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 RPUSD2Q8IZ73 545 aaKnown RBP14.88□□□□□ -0.03
CDH1-201ENST00000261769 PARD3BQ8TEW8 1205 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 PDCD2LQ9BRP1 358 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 VTA1Q9NP79 307 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 SPTLC3Q9NUV7 552 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 TRIM17Q9Y577 477 aa14.88□□□□□ -0.03
CDH1-201ENST00000261769 MSH4O15457 936 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 CYBBP04839 570 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 AKR1A1P14550 325 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 ACOT2P49753 483 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 BASP1P80723 227 aaKnown RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 MAP7Q14244 749 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 EFHC2Q5JST6 749 aa14.87□□□□□ -0.03
CDH1-201ENST00000261769 FBXO16Q8IX29 292 aaPredicted RBP14.87□□□□□ -0.03
CDH1-201ENST00000261769 COLEC11Q9BWP8 271 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms