RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 NELFCDQ8IXH7 590 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 ARMC2Q8NEN0 867 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 LSM14BQ9BX40 385 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 BHMT2Q9H2M3 363 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 TTC7AQ9ULT0 858 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 A0A0A6YYK5 440 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 KRIT1O00522 736 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 LIN7AO14910 233 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 CTNND1O60716 968 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 FAM13AO94988 1023 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 NR2F2P24468 414 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 MMP13P45452 471 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 POLR2FP61218 127 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 DHX9Q08211 1270 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 SLFN11Q7Z7L1 901 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 GLIS3Q8NEA6 775 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 NSMCE1Q8WV22 266 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 MXRA8Q9BRK3 442 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 ZNF577Q9BSK1 485 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 RAB17Q9H0T7 212 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 HOMER3Q9NSC5 361 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 TBC1D7Q9P0N9 293 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 CCPG1Q9ULG6 757 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 DIS3Q9Y2L1 958 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 NPHP3-ACAD11A0A0J9YXS1 232 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 DAPK3O43293 454 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 PPP1R12BO60237 982 aaPredicted RBP11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 ATP2C2O75185 946 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 RPSAP08865 295 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 FLT3P36888 993 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 NPEPPSP55786 919 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 PSMC6P62333 389 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 RASA3Q14644 834 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 ACCSLQ4AC99 568 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 SYCE1Q8N0S2 351 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 METTL13Q8N6R0 699 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 ATXN2LQ8WWM7 1075 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 NSRP1Q9H0G5 558 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 INTUQ9ULD6 942 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 TRPC6Q9Y210 931 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 DAAM1Q9Y4D1 1078 aa11.66□□□□□ -0.54
CHRNA1-201ENST00000261007 GOLGA6L10A0A0M3HER8 536 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 CCDC169A6NNP5 214 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 DCDC2CA8MYV0 355 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 EML1O00423 815 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 SLITRK3O94933 977 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 ANP32DO95626 131 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 IBSPP21815 317 aaPredicted RBP11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 CCND1P24385 295 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 ZNF131P52739 623 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 CYP4A11Q02928 519 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 LMNB2Q03252 620 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 RAPGEF1Q13905 1077 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 ZYXQ15942 572 aaKnown RBP11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 ANKRD27Q96NW4 1050 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 SPAG5Q96R06 1193 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 PACSIN1Q9BY11 444 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 MAF1Q9H063 256 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 DDX47Q9H0S4 455 aaKnown RBP11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 GANQ9H2C0 597 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 PARVGQ9HBI0 331 aa11.65□□□□□ -0.54
CHRNA1-201ENST00000261007 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 GTPBP10A4D1E9 387 aaKnown RBP11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 AFPP02771 609 aaKnown RBP11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 MMEP08473 750 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 CHN1P15882 459 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 POU5F1Q01860 360 aaKnown RBP11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 ALCAMQ13740 583 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 CLUL1Q15846 466 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 B3GNT9Q6UX72 402 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 C1orf186Q6ZWK4 172 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 TPH2Q8IWU9 490 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 TPCN2Q8NHX9 752 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 TBC1D31Q96DN5 1066 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 STAMBPL1Q96FJ0 436 aa11.65□□□□□ -0.55
CHRNA1-201ENST00000261007 DYDC2Q96IM9 177 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms