RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 FLOT1O75955 427 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 PLCG2P16885 1265 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF658Q5TYW1 1059 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 C1orf127Q8N9H9 656 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 LRRC3BQ96PB8 259 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 TMEM117Q9H0C3 514 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 PDZD7Q9H5P4 517 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 L2HGDHQ9H9P8 463 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 TMPRSS4Q9NRS4 437 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 TBC1D7Q9P0N9 293 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 ZSCAN5CA6NGD5 496 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 INPPL1O15357 1258 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 RNF20Q5VTR2 975 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 GPRIN1Q7Z2K8 1008 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 MAP4K3Q8IVH8 894 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 STKLD1Q8NE28 680 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 OR52K2Q8NGK3 314 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 ERGIC2Q96RQ1 377 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 UBAC1Q9BSL1 405 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 GTF2IRD1Q9UHL9 959 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 ADAM12O43184 909 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 LILRB3O75022 631 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 HIP1RO75146 1068 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 MAFO75444 373 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 PEX5P50542 639 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 KANK3Q6NY19 840 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 FCHSD1Q86WN1 690 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 LRRC71Q8N4P6 559 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 PARD3BQ8TEW8 1205 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 NFE2L3Q9Y4A8 694 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 ANO9A1A5B4 782 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 ARF4P18085 180 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 GATMP50440 423 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 C12orf56Q8IXR9 622 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 TMEM143Q96AN5 459 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 SUGCTQ9HAC7 445 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 RBM10P98175 930 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 FAAP100Q0VG06 881 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 CSPP1Q1MSJ5 1256 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 IER5LQ5T953 404 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 FAM126BQ8IXS8 530 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 FBXW7Q969H0 707 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 FHOD1Q9Y613 1164 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 B4GALT4O60513 344 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 GAD2Q05329 585 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 TAF5Q15542 800 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF276Q8N554 614 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 ANKLE1Q8NAG6 615 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 VN1R2Q8NFZ6 395 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 MRFAP1L1Q96HT8 127 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 RIT2Q99578 217 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 SENP6Q9GZR1 1112 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 CXXC1Q9P0U4 656 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 TSPAN1O60635 241 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 PGK1P00558 417 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 TRIM49P0CI25 452 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 TRIM49CP0CI26 452 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 ADCY7P51828 1080 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 NAPAP54920 295 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 NONOQ15233 471 aaKnown RBP eCLIP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 CLLU1OSQ5K130 101 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF444Q8N0Y2 327 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 PEBP4Q96S96 227 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 TRMT13Q9NUP7 481 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
TOPBP1-201ENST00000260810 CCDC69A6NI79 296 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ALKBH5Q6P6C2 394 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 CREG2Q8IUH2 290 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 AFG1LQ8WV93 481 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 C18orf25Q96B23 403 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 PI4K2AQ9BTU6 479 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 TLR10Q9BXR5 811 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 LGALS2P05162 132 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 SUPT20HL2P0C7V6 817 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 IRAK1P51617 712 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 SUPT20HL1Q3ZLR7 823 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ATL3Q6DD88 541 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 NOP9Q86U38 636 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM228AQ86W67 206 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM200AQ8TCP9 573 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 TAS1R2Q8TE23 839 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 RABGGTAQ92696 567 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 GSDMAQ96QA5 445 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 DESI2Q9BSY9 194 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 TXLNGYQ9BZA5 131 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 TNMDQ9H2S6 317 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 CCPG1Q9ULG6 757 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 AGPSO00116 658 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 EYA4O95677 639 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 DUSP28Q4G0W2 176 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 UNC13DQ70J99 1090 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ABRAQ8N0Z2 381 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 KLHL34Q8N239 644 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 KCNG4Q8TDN1 519 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ATP8B4Q8TF62 1192 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 PSPC1Q8WXF1 523 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 LARP4BQ92615 738 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms