RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 LRRC8DQ7L1W4 858 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 ACCSQ96QU6 501 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 PPP1R12CQ9BZL4 782 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 TMEM39AQ9NV64 488 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 KIF20AO95235 890 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 GHRP10912 638 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 PMS1P54277 932 aaKnown RBP17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 STIM1Q13586 685 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 ANO6Q4KMQ2 910 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 FBXO47Q5MNV8 452 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 FAM228AQ86W67 206 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 WNT8AQ9H1J5 351 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 KCTD10Q9H3F6 313 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 PRMT7Q9NVM4 692 aaPredicted RBP17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 CTNND2Q9UQB3 1225 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 ALPK3Q96L96 1907 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TISP43B9A030 160 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 ACKR2O00590 384 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 PSMA7O14818 248 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TGFB1I1O43294 461 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 PPP1R2P41236 205 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 LPIN1Q14693 890 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 GPNMBQ14956 572 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 MED15Q96RN5 788 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TARS2Q9BW92 718 aaKnown RBP17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TMEM206Q9H813 350 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 AGO3Q9H9G7 860 aaKnown RBP17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 DACH1Q9UI36 760 aa17.35■□□□□ 0.37
CCDC90B-201ENST00000260054 TSPAN1O60635 241 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 PIGRP01833 764 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 SFPQP23246 707 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 CYP2C18P33260 490 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 CCL23P55773 120 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 PAK1Q13153 545 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 PRPF4BQ13523 1007 aaKnown RBP17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 CENPPQ6IPU0 288 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 SLC39A4Q6P5W5 647 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 CATSPER4Q7RTX7 472 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 SYCP3Q8IZU3 236 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 NELFBQ8WX92 580 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 DHTKD1Q96HY7 919 aaPredicted RBP17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 PRIMPOLQ96LW4 560 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 MRPL4Q9BYD3 311 aaKnown RBP17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 PRDM5Q9NQX1 630 aaPredicted RBP17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 PCDH10Q9P2E7 1040 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 EXOC7Q9UPT5 735 aa17.34■□□□□ 0.37
CCDC90B-201ENST00000260054 TRIM49BA6NDI0 452 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 HNRNPDLO14979 420 aaKnown RBP17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 KIAA0355O15063 1070 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 RPS6KA5O75582 802 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 ERLIN2O94905 339 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 CCNE1P24864 410 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 ITGB8P26012 769 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 STX17P56962 302 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 ZCWPW2Q504Y3 356 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 TSHZ1Q6ZSZ6 1077 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 P2RX5Q93086 422 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 BICD1Q96G01 975 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 SCLYQ96I15 445 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 GBP3Q9H0R5 595 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 SQORQ9Y6N5 450 aa17.33■□□□□ 0.37
CCDC90B-201ENST00000260054 CNTNAP2Q9UHC6 1331 aa17.33■□□□□ 0.36
CCDC90B-201ENST00000260054 ANKRD63C9JTQ0 380 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 NBNO60934 754 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ARF4P18085 180 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ERCC5P28715 1186 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 HOXA11P31270 313 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 CD52P31358 61 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 PCBP1Q15365 356 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ANKRD40Q6AI12 368 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ZPBP2Q6X784 338 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 CPB2Q96IY4 423 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ACO2Q99798 780 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 TSPY26PQ9H489 355 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 TYW1Q9NV66 732 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 PADI3Q9ULW8 664 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ST3GAL5Q9UNP4 418 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 TANC1Q9C0D5 1861 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 PDXKO00764 312 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 LIG4P49917 911 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 NFX1Q12986 1120 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 TTI2Q6NXR4 508 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 CDR2LQ86X02 465 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ZBTB45Q96K62 511 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 HTATIP2Q9BUP3 242 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 AGPAT3Q9NRZ7 376 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 AGPAT5Q9NUQ2 364 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 RWDD2AQ9UIY3 292 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
CCDC90B-201ENST00000260054 ABLIM1O14639 778 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 GPR182O15218 404 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms