RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 LONRF3Q496Y0 759 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 POTEBQ6S5H4 581 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 MMGT1Q8N4V1 131 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ATP6V0D2Q8N8Y2 350 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 EXD1Q8NHP7 514 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 RMDN1Q96DB5 314 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 DEFB118Q96PH6 123 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 BBS4Q96RK4 519 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 GREM2Q9H772 168 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 LGR6Q9HBX8 967 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 KCNK9Q9NPC2 374 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 ZSCAN32Q9NX65 697 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 LNPEPQ9UIQ6 1025 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 KCNH3Q9ULD8 1083 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 PCDHA10Q9Y5I2 948 aa4.31□□□□□ -1.72
RNF38-201ENST00000259605 SALL3Q9BXA9 1300 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 BIVM-ERCC5R4GMW8 1640 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 PRR23AA6NEV1 266 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 GLTPD2A6NH11 291 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 C2CD2LO14523 706 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 DDHD2O94830 711 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 DDNO94850 711 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 PTPN3P26045 913 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 HSPA4P34932 840 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 MAP2K2P36507 400 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 DPP6P42658 865 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 RANBP1P43487 201 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CLK3P49761 638 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 SLC26A2P50443 739 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 RBP5P82980 135 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 NFIAQ12857 509 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 IMPG1Q17R60 797 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 TAF1BQ53T94 588 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 XKR3Q5GH77 459 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZNF484Q5JVG2 852 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 KIAA1324Q6UXG2 1013 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 CD302Q8IX05 232 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 AOPEPQ8N6M6 819 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 FAM227BQ96M60 508 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 SEC62Q99442 399 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 C11orf84Q9BUA3 381 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 LRRC2Q9BYS8 371 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 BCO2Q9BYV7 579 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ABHD16BQ9H3Z7 469 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 NMRK2Q9NPI5 230 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 NDFIP2Q9NV92 336 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 NMRK1Q9NWW6 199 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 MYO1AQ9UBC5 1043 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 SFMBT1Q9UHJ3 866 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 SCINQ9Y6U3 715 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 TCOF1Q13428 1488 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 C1QTNF3-AMACRE9PGA6 284 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 H3BRJ5 948 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 PPP1R12AO14974 1030 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 RPN2P04844 631 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CHRM1P11229 460 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 RPL21P46778 160 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 ADKP55263 362 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 KCNQ4P56696 695 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 PPATQ06203 517 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZNF177Q13360 481 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 BMP2KLQ5H9B9 411 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 FAM46CQ5VWP2 391 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CREB3L3Q68CJ9 461 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 PI16Q6UXB8 463 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 SKAP1Q86WV1 359 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CCDC105Q8IYK2 499 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 TMEM35BQ8NCS4 154 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 MIPOL1Q8TD10 442 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 TTC17Q96AE7 1141 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 REXO5Q96IC2 774 aaKnown RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 MAGEB10Q96LZ2 347 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 FAM20AQ96MK3 541 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 EGFL8Q99944 293 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CIPCQ9C0C6 399 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 JPH1Q9HDC5 661 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 HACD3Q9P035 362 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 SUN2Q9UH99 717 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 MAPKBP1O60336 1514 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZNF839A8K0R7 811 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 CLIC2O15247 247 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZC3H11AO75152 810 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZBED1O96006 694 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 LAG3P18627 525 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CDK8P49336 464 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 GRIN1Q05586 938 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 MED21Q13503 144 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ME3Q16798 604 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ARSJQ5FYB0 599 aaPredicted RBP4.3□□□□□ -1.72
RNF38-201ENST00000259605 ZNF544Q6NX49 715 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 CCDC62Q6P9F0 684 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 ANGPTL8Q6UXH0 198 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 C16orf59Q7L2K0 433 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 TAS2R42Q7RTR8 314 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 DGKHQ86XP1 1220 aa4.3□□□□□ -1.72
RNF38-201ENST00000259605 KIRREL3Q8IZU9 778 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms