RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 JMJD4Q9H9V9 463 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 BCAP29Q9UHQ4 241 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 CYP2C19P33261 490 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 NAMPTP43490 491 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 KCNB1Q14721 858 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 RESP18Q5W5W9 173 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 CATSPERGQ6ZRH7 1159 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 MRPS31Q92665 395 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF653Q96CK0 615 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
PRPF38A-201ENST00000257181 SPDYE5A6NIY4 337 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 PTPRAP18433 802 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 VAMP7P51809 220 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 RPS6P62753 249 aaKnown RBP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ACVR2BQ13705 512 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 LONRF2Q1L5Z9 754 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF280DQ6N043 979 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 STN1Q9H668 368 aaKnown RBP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 CCDC85CA6NKD9 419 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ATP2C1P98194 919 aaPredicted RBP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ABRAQ8N0Z2 381 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 UBE2TQ9NPD8 197 aaPredicted RBP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 FAM114A2Q9NRY5 505 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 CLIC4Q9Y696 253 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 GFPT2O94808 682 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ARHGEF18Q6ZSZ5 1173 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 CCDC149Q6ZUS6 474 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 VPS52Q8N1B4 723 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 SLC16A4O15374 487 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ETFBP38117 255 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 FXR2P51116 673 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 Q4G0T1 1027 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 MKNK1Q9BUB5 465 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 ZNF212Q9UDV6 495 aa14.38□□□□□ -0.11
PRPF38A-201ENST00000257181 BCL9LQ86UU0 1499 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 MAPTP10636 758 aaKnown RBP14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 SDC4P31431 198 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 OSTNP61366 133 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 MFSD10Q14728 455 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 CES5AQ6NT32 575 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 PPANQ9NQ55 473 aaKnown RBP14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 PXMP2Q9NR77 195 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 DNAI1Q9UI46 699 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 I3L4J1 428 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 SOCS7O14512 581 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 CEP104O60308 925 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 RNASEH1O60930 286 aaKnown RBP14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 HIP1RO75146 1068 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 DGKZQ13574 1117 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 GTF2H3Q13889 308 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 VGLL4Q14135 290 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 CYP26B1Q9NR63 512 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 AFG3L2Q9Y4W6 797 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 VWA5AO00534 786 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 NEMP1O14524 444 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 GRIK1P39086 918 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 PSEN2P49810 448 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 ANO4Q32M45 955 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 TLK2Q86UE8 772 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 PAGE5Q96GU1 130 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 PCIF1Q9H4Z3 704 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 NLRC4Q9NPP4 1024 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 ADORA2AP29274 412 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 THOC5Q13769 683 aaKnown RBP14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 ARFGAP3Q9NP61 516 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 NFU1Q9UMS0 254 aa14.37□□□□□ -0.11
PRPF38A-201ENST00000257181 KRT7P08729 469 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 TYW1BQ6NUM6 668 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 KCTD6Q8NC69 237 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 KRT12Q99456 494 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 EPAS1Q99814 870 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 UTP6Q9NYH9 597 aaKnown RBP14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 COL3A1P02461 1466 aaPredicted RBP14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 ADCY6O43306 1168 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 CDC25BP30305 580 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 SREBF1P36956 1147 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 ACTR2P61160 394 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 COASYQ13057 564 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 PHF20Q9BVI0 1012 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 LHX1P48742 406 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 HSP90AA4PQ58FG1 418 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 TRIM42Q8IWZ5 723 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 ANKS1AQ92625 1134 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 KCNQ5Q9NR82 932 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 ADCK5Q3MIX3 580 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 ATP8B4Q8TF62 1192 aa14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 RAB3IPQ96QF0 476 aaPredicted RBP14.36□□□□□ -0.11
PRPF38A-201ENST00000257181 FAM213AQ9BRX8 229 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms