RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PCDHB13Q9Y5F0 798 aa15.53■□□□□ 0.08
VPS25-201ENST00000253794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.52■□□□□ 0.08
VPS25-201ENST00000253794 TSPAN1O60635 241 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 PRKCBP05771 671 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 SYN1P17600 705 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 HOXA11P31270 313 aaPredicted RBP15.52■□□□□ 0.08
VPS25-201ENST00000253794 CASP5P51878 434 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 STK4Q13043 487 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 DSC3Q14574 896 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 L1TD1Q5T7N2 865 aaKnown RBP15.52■□□□□ 0.08
VPS25-201ENST00000253794 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 STXBP4Q6ZWJ1 553 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 C16orf59Q7L2K0 433 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 TRIML1Q8N9V2 468 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 KIAA0895Q8NCT3 520 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 DBF4BQ8NFT6 615 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 ZNF507Q8TCN5 953 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 SEPT8Q92599 483 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 CCDC51Q96ER9 411 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 FGFBP2Q9BYJ0 223 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 TMX1Q9H3N1 280 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 TBX20Q9UMR3 447 aa15.52■□□□□ 0.08
VPS25-201ENST00000253794 A0A1B0GUA9 196 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 CSDE1O75534 798 aaKnown RBP15.51■□□□□ 0.07
VPS25-201ENST00000253794 BAIAP3O94812 1187 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 ERLIN2O94905 339 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 EDN1P05305 212 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 MYBP10242 640 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
VPS25-201ENST00000253794 MORC3Q14149 939 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 CAMK4Q16566 473 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 CCDC183Q5T5S1 534 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 PSRC1Q6PGN9 363 aaPredicted RBP15.51■□□□□ 0.07
VPS25-201ENST00000253794 CATSPER4Q7RTX7 472 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 HPS3Q969F9 1004 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 GDF15Q99988 308 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 MRPL4Q9BYD3 311 aaKnown RBP15.51■□□□□ 0.07
VPS25-201ENST00000253794 SCN5AQ14524 2016 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 CEP290O15078 2479 aa15.51■□□□□ 0.07
VPS25-201ENST00000253794 EFCAB14O75071 495 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 CAPN15O75808 1086 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 GCNT3O95395 438 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 ARF4P18085 180 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 FGFR4P22455 802 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 PROZP22891 400 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 STRN3Q13033 797 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 PRPF4BQ13523 1007 aaKnown RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 TCTN1Q2MV58 587 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 ZC2HC1CQ53FD0 456 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 ZNF658Q5TYW1 1059 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 GUF1Q8N442 669 aaKnown RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 GLIS3Q8NEA6 775 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 ERCC4Q92889 916 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 SYAP1Q96A49 352 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 ACO2Q99798 780 aaKnown RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 LBHD1Q9BQE6 289 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 TSPYL2Q9H2G4 693 aaPredicted RBP15.5■□□□□ 0.07
VPS25-201ENST00000253794 TMEM206Q9H813 350 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 PTPRHQ9HD43 1115 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 TBC1D7Q9P0N9 293 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 MAN1B1Q9UKM7 699 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 TNFSF13BQ9Y275 285 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 TET1Q8NFU7 2136 aa15.5■□□□□ 0.07
VPS25-201ENST00000253794 ABHD14A-ACY1A0A1B0GW23 586 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 TTLL13PA6NNM8 815 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 ABLIM1O14639 778 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 B4GALT5O43286 388 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 KIF20AO95235 890 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 HOXD13P35453 343 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 MAGEA10P43363 369 aaPredicted RBP15.49■□□□□ 0.07
VPS25-201ENST00000253794 EPHB4P54760 987 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 SNRPFP62306 86 aaKnown RBP15.49■□□□□ 0.07
VPS25-201ENST00000253794 NCBP1Q09161 790 aaKnown RBP15.49■□□□□ 0.07
VPS25-201ENST00000253794 NFX1Q12986 1120 aaKnown RBP15.49■□□□□ 0.07
VPS25-201ENST00000253794 TMEM240Q5SV17 173 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 NOTUMQ6P988 496 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 DEFB128Q7Z7B8 93 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 TMEM174Q8WUU8 243 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 ACCSQ96QU6 501 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 SLC39A2Q9NP94 309 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 RGS18Q9NS28 235 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 EXOC7Q9UPT5 735 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 STYXL1Q9Y6J8 313 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 PDE4DIPQ5VU43 2346 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
VPS25-201ENST00000253794 H0YGN5 161 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 N4BP3O15049 544 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 MGEA5O60502 916 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 TOM1L1O75674 476 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 ACTN1P12814 892 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 BMP6P22004 513 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 BMP8BP34820 402 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 PPP1R2P41236 205 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 FAM189BP81408 668 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 KCNA1Q09470 495 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 IKBKEQ14164 716 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 ATF7IP2Q5U623 682 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms