RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 DOCK3Q8IZD9 2030 aa20.44■□□□□ 0.86
TNFSF9-201ENST00000245817 RRN3P2A6NIE6 340 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 IGHA2P01877 340 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 CHMP4BP1P59074 171 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 ZBED6P86452 979 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 PRKCZQ05513 592 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 BFSP1Q12934 665 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 MKRN4PQ13434 485 aaPredicted RBP20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 TAS1R3Q7RTX0 852 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 CACNA2D4Q7Z3S7 1137 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
TNFSF9-201ENST00000245817 KIAA0391O15091 583 aaKnown RBP20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 MATR3P43243 847 aaKnown RBP eCLIP20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 KCNJ6P48051 423 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 CLCN3P51790 818 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 ARHGEF6Q15052 776 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 GRIK4Q16099 956 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 EXOC3L4Q17RC7 722 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 GBP6Q6ZN66 633 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 USP37Q86T82 979 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 C17orf53Q8N3J3 647 aaPredicted RBP20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 NLRP4Q96MN2 994 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 CRACR2AQ9BSW2 395 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 LSM14BQ9BX40 385 aaKnown RBP20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 GOLGA8IPA6NC78 632 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 GOLGA8JA6NMD2 632 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 TULP1O00294 542 aaPredicted RBP20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 CCP110O43303 1012 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 MYL3P08590 195 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 ADSSP30520 456 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 VAMP7P51809 220 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 KCNMA1Q12791 1236 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 MAPK6Q16659 721 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 CYP26C1Q6V0L0 522 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 TMTC1Q8IUR5 882 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 TRIB2Q92519 343 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 LENG1Q96BZ8 264 aaPredicted RBP20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 EDEM3Q9BZQ6 932 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 TTYH3Q9C0H2 523 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 SPC25Q9HBM1 224 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 KIAA1586Q9HCI6 787 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 AKT3Q9Y243 479 aa20.42■□□□□ 0.86
TNFSF9-201ENST00000245817 DUSP11O75319 330 aaKnown RBP20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 PIGRP01833 764 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 CLCN1P35523 988 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 CTCFP49711 727 aaPredicted RBP20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 CETN1Q12798 172 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 SNRNP35Q16560 246 aaKnown RBP20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 TMEM139Q8IV31 216 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 GPD1LQ8N335 351 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 CD99L2Q8TCZ2 262 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 SAAL1Q96ER3 474 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 DNAJC7Q99615 494 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 KATNAL1Q9BW62 490 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 MRPL4Q9BYD3 311 aaKnown RBP20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 AGPAT5Q9NUQ2 364 aa20.41■□□□□ 0.86
TNFSF9-201ENST00000245817 MGAMO43451 1857 aa20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 GTPBP10A4D1E9 387 aaKnown RBP20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 RNF225M0QZC1 329 aaPredicted RBP20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 N4BP1O75113 896 aaKnown RBP20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 F2P00734 622 aa20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 FSCN1Q16658 493 aaKnown RBP20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 KIAA0753Q2KHM9 967 aa20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 CDCA2Q69YH5 1023 aaPredicted RBP20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 SLC39A4Q6P5W5 647 aa20.4■□□□□ 0.86
TNFSF9-201ENST00000245817 LDHAP00338 332 aaKnown RBP20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 HSPA8P11142 646 aaKnown RBP20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 CYBAP13498 195 aa20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 PHKA2P46019 1235 aa20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 FMO5P49326 533 aa20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 MFSD10Q14728 455 aa20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 TARS2Q9BW92 718 aaKnown RBP20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 NUCKS1Q9H1E3 243 aaKnown RBP20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 CEP72Q9P209 647 aa20.39■□□□□ 0.86
TNFSF9-201ENST00000245817 NRCAMQ92823 1304 aa20.39■□□□□ 0.85
TNFSF9-201ENST00000245817 ZNF233A6NK53 670 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 INO80B-WBP1J3KQ70 363 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 KPNA6O60684 536 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 GNRH1P01148 92 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 PRKCBP05771 671 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 TRIM49P0CI25 452 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 TRIM49CP0CI26 452 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 BEX3Q00994 111 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 POU5F1BQ06416 359 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 TMEM132AQ24JP5 1023 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 ZPBP2Q6X784 338 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 ZBTB10Q96DT7 871 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 SCLT1Q96NL6 688 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 FAM213AQ9BRX8 229 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 INO80BQ9C086 356 aaPredicted RBP20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 SPTLC3Q9NUV7 552 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 SETD4Q9NVD3 440 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 GCNT4Q9P109 453 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 AGO2Q9UKV8 859 aaKnown RBP20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 STYXL1Q9Y6J8 313 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 CASP8AP2Q9UKL3 1982 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 ZSCAN12O43309 604 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms