RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PPP1R3GB7ZBB8 358 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 KLHL38Q2WGJ6 581 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 C12orf60Q5U649 245 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 C1orf146Q5VVC0 180 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 EXOC8Q8IYI6 725 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 ZBED8Q8IZ13 594 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 LXNQ9BS40 222 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 PFDN6O15212 129 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 HSPA4LO95757 839 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 OR2W6PQ8NHA6 318 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 PPP6R3Q5H9R7 873 aaPredicted RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 S100BP04271 92 aaPredicted RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 STK4Q13043 487 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 PDIA2Q13087 525 aaKnown RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 NKX1-1Q15270 411 aaPredicted RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 THNSL1Q8IYQ7 743 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 SLC35G2Q8TBE7 412 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 EFHD1Q9BUP0 239 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 EDEM3Q9BZQ6 932 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 NGRNQ9NPE2 291 aaKnown RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 AKR1B1P15121 316 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 NMT1P30419 496 aaKnown RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 SLC12A1Q13621 1099 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 C4orf50Q6ZRC1 276 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 RFX5P48382 616 aaPredicted RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 DCPSQ96C86 337 aaKnown RBP21.15■□□□□ 0.98
SOX4-201ENST00000244745 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 OVOS2A0A0J9YW53 1432 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 OVOS2Q6IE36 1432 aa21.15■□□□□ 0.98
SOX4-201ENST00000244745 GGPS1O95749 300 aa21.14■□□□□ 0.98
SOX4-201ENST00000244745 SLC4A1P02730 911 aa21.14■□□□□ 0.98
SOX4-201ENST00000244745 GNA15P30679 374 aa21.14■□□□□ 0.98
SOX4-201ENST00000244745 HSPA9P38646 679 aaKnown RBP21.14■□□□□ 0.98
SOX4-201ENST00000244745 IZUMO3Q5VZ72 239 aa21.14■□□□□ 0.98
SOX4-201ENST00000244745 hCG_2014768A0A024R1R8 64 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 WDR64B1ANS9 1081 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 CHN1P15882 459 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 PDS5AQ29RF7 1337 aaKnown RBP21.14■□□□□ 0.97
SOX4-201ENST00000244745 CALB1P05937 261 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 SPOUT1Q5T280 376 aaKnown RBP21.14■□□□□ 0.97
SOX4-201ENST00000244745 HEY1Q9Y5J3 304 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 MYMKA6NI61 221 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 DIAPH2O60879 1101 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 LRIG3Q6UXM1 1119 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 LRRC31Q6UY01 552 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 LRRC4Q9HBW1 653 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 NUB1Q9Y5A7 615 aa21.14■□□□□ 0.97
SOX4-201ENST00000244745 ESYT2A0FGR8 921 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 LPXNO60711 386 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 EEF1DP29692 281 aaKnown RBP21.13■□□□□ 0.97
SOX4-201ENST00000244745 TMEM35BQ8NCS4 154 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
SOX4-201ENST00000244745 TNS3Q68CZ2 1445 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 UBE4BO95155 1302 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 TCP11X1B4DZS4 312 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 F5H423 210 aaPredicted RBP21.13■□□□□ 0.97
SOX4-201ENST00000244745 EEF1B2P24534 225 aaKnown RBP21.13■□□□□ 0.97
SOX4-201ENST00000244745 USP11P51784 963 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 PDIA5Q14554 519 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 RSBN1LQ6PCB5 846 aaPredicted RBP21.13■□□□□ 0.97
SOX4-201ENST00000244745 SULF1Q8IWU6 871 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 SIX6OS1Q8N1H7 587 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 NEDD1Q8NHV4 660 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 SEL1LQ9UBV2 794 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 BAG5Q9UL15 447 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 ENO4A6NNW6 628 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 IP6K2Q9UHH9 426 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 FEM1BQ9UK73 627 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 ZNF699Q32M78 642 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 ZNF667Q5HYK9 610 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 SEC16BQ96JE7 1060 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 PNKPQ96T60 521 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 RMDN3Q96TC7 470 aa21.13■□□□□ 0.97
SOX4-201ENST00000244745 RAD51CO43502 376 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 AP2B1P63010 937 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 SKA2Q8WVK7 121 aaPredicted RBP21.12■□□□□ 0.97
SOX4-201ENST00000244745 FAM161BQ96MY7 647 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 CYP26A1O43174 497 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 IRAK1P51617 712 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 TTC13Q8NBP0 860 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 ZIM3Q96PE6 472 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 CD248Q9HCU0 757 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 SLC40A1Q9NP59 571 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 GNGT2O14610 69 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 MYBL1P10243 752 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 LSP1P33241 339 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 MDM2Q00987 491 aaPredicted RBP21.12■□□□□ 0.97
SOX4-201ENST00000244745 Q3C1V9 767 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 KRT39Q6A163 491 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 FUCA2Q9BTY2 467 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 PCSK1NQ9UHG2 260 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 APOBEC2Q9Y235 224 aaKnown RBP21.12■□□□□ 0.97
SOX4-201ENST00000244745 PHF20L1A8MW92 1017 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 STXBP3O00186 592 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 PDXKO00764 312 aa21.12■□□□□ 0.97
SOX4-201ENST00000244745 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
SOX4-201ENST00000244745 RFX1P22670 979 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms