RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 LRRC34Q8IZ02 419 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 CCT6BQ92526 530 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 ZNF622Q969S3 477 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 FAM129AQ9BZQ8 928 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 PARVGQ9HBI0 331 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 MLXIPLQ9NP71 852 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 UBE2TQ9NPD8 197 aaPredicted RBP16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 OLFML3Q9NRN5 406 aa16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 TPX2Q9ULW0 747 aaKnown RBP16.6■□□□□ 0.25
PCDHB8-201ENST00000239444 IGLV3-22A0A075B6J6 115 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 GTPBP10A4D1E9 387 aaKnown RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 EXOC3O60645 756 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 FTLP02792 175 aaPredicted RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 LRRC14Q15048 493 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 MOXD1Q6UVY6 613 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 OTUD6AQ7L8S5 288 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 FAM20AQ96MK3 541 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 HSD17B14Q9BPX1 270 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 CARD9Q9H257 536 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 DNAJC17Q9NVM6 304 aaKnown RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 GOLGA6L10A0A0M3HER8 536 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 CLGNO14967 610 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 CHUKO15111 745 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 TBX3O15119 743 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 CCDC172P0C7W6 258 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 GSCP56915 257 aaPredicted RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 LRCH2Q5VUJ6 765 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 ZNF720Q7Z2F6 126 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 MGARPQ8TDB4 240 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 ATXN2LQ8WWM7 1075 aaKnown RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 ZNF317Q96PQ6 595 aaPredicted RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 ELAC2Q9BQ52 826 aaKnown RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 FRMD4BQ9Y2L6 1034 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 FRMPD4Q14CM0 1322 aa16.59■□□□□ 0.25
PCDHB8-201ENST00000239444 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 PLSCR1O15162 318 aa16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 CREB1P16220 341 aa16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 PTGIRP43119 386 aa16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 FAM133BQ5BKY9 247 aaKnown RBP16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 SYCP3Q8IZU3 236 aa16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.25
PCDHB8-201ENST00000239444 SCN9AQ15858 1988 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 EMSYQ7Z589 1322 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 RGS16O15492 202 aaPredicted RBP16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 CALCAP01258 141 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 COMTP21964 271 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 GCLMP48507 274 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 CCDC174Q6PII3 467 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 AGPAT1Q99943 283 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 POLR3CQ9BUI4 534 aaPredicted RBP16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 GLT8D2Q9H1C3 349 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 TTC7AQ9ULT0 858 aaPredicted RBP16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 CEP83Q9Y592 693 aa16.58■□□□□ 0.24
PCDHB8-201ENST00000239444 ZNF646O15015 1829 aaPredicted RBP16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 ANKRD62A6NC57 917 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 PYGMP11217 842 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 ECE1P42892 770 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 PPP3CAQ08209 521 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 CCDC137Q6PK04 289 aaKnown RBP16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 HS2ST1Q7LGA3 356 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 MKL1Q969V6 931 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 ACTR5Q9H9F9 607 aaPredicted RBP16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 HGSO14964 777 aaPredicted RBP16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 GH2P01242 217 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 VIMP08670 466 aaKnown RBP16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 ANXA13P27216 316 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 BFSP1Q12934 665 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 PLCB4Q15147 1175 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 SNCBQ16143 134 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 HOOK3Q86VS8 718 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 TBC1D31Q96DN5 1066 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 PCDHB18PQ96TA0 734 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
PCDHB8-201ENST00000239444 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 HIBCHQ6NVY1 386 aaPredicted RBP16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 SGSM3Q96HU1 749 aa16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 IDI2Q9BXS1 227 aa16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 SGPL1O95470 568 aa16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 ARP10275 920 aa16.56■□□□□ 0.24
PCDHB8-201ENST00000239444 GAP43P17677 238 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms