RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PEX5P50542 639 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 LRRC14Q15048 493 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 BANK1Q8NDB2 785 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 PIGOQ8TEQ8 1089 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 AGAP11Q8TF27 550 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 ART4Q93070 314 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 TCRBV7S2A1N4TA0A589 114 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 RTN2O75298 545 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 FAM13AO94988 1023 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 ANP32DO95626 131 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 SLC15A2Q16348 729 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 GALNTL6Q49A17 601 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 THOC1Q96FV9 657 aaKnown RBP16.71■□□□□ 0.26
DDX55-201ENST00000238146 RSRC1Q96IZ7 334 aaKnown RBP16.71■□□□□ 0.26
DDX55-201ENST00000238146 POLR3CQ9BUI4 534 aaPredicted RBP16.71■□□□□ 0.26
DDX55-201ENST00000238146 USP40Q9NVE5 1235 aa16.71■□□□□ 0.26
DDX55-201ENST00000238146 USP15Q9Y4E8 981 aaPredicted RBP16.71■□□□□ 0.26
DDX55-201ENST00000238146 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 FTLP02792 175 aaPredicted RBP16.7■□□□□ 0.26
DDX55-201ENST00000238146 ALADP13716 330 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 CYP2J2P51589 502 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 NAA25Q14CX7 972 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 MAB21L3Q8N8X9 362 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 CYP2W1Q8TAV3 490 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 CCHCR1Q8TD31 782 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
DDX55-201ENST00000238146 HOMER3Q9NSC5 361 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 FGFR1OP2Q9NVK5 253 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 CHORDC1Q9UHD1 332 aaPredicted RBP16.7■□□□□ 0.26
DDX55-201ENST00000238146 C15orf41Q9Y2V0 281 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 STK24Q9Y6E0 443 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 PYGMP11217 842 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 COMTP21964 271 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 PAX7P23759 505 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 ALDH5A1P51649 535 aaPredicted RBP16.7■□□□□ 0.26
DDX55-201ENST00000238146 SLC8A3P57103 927 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 ROPN1BQ9BZX4 212 aaPredicted RBP16.7■□□□□ 0.26
DDX55-201ENST00000238146 ECT2Q9H8V3 914 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 ROPN1Q9HAT0 212 aaPredicted RBP16.7■□□□□ 0.26
DDX55-201ENST00000238146 DMAC2Q9NW81 257 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 PTPN22Q9Y2R2 807 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
DDX55-201ENST00000238146 TCP11X1B4DZS4 312 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 GGPS1O95749 300 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 CREB1P16220 341 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 COILP38432 576 aaPredicted RBP16.69■□□□□ 0.26
DDX55-201ENST00000238146 MYL7Q01449 175 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 LONRF1Q17RB8 773 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 ZNF568Q3ZCX4 644 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 CCDC25Q86WR0 208 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 LMO3Q8TAP4 145 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 MGARPQ8TDB4 240 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 DYDC1Q8WWB3 177 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 RUNDC3BQ96NL0 473 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 PFASO15067 1338 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 SREBF1P36956 1147 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 KCNJ1P48048 391 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 SNAP25P60880 206 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 TCEAL1Q15170 157 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 C1orf186Q6ZWK4 172 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 OTUD6AQ7L8S5 288 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 TBC1D16Q8TBP0 767 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 AGPAT3Q9NRZ7 376 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
DDX55-201ENST00000238146 TMEM120BA0PK00 339 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
DDX55-201ENST00000238146 ZBTB39O15060 712 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 ZNF131P52739 623 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 GTF2IP78347 998 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 BNIP1Q12981 228 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 MESDQ14696 234 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 HS2ST1Q7LGA3 356 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 ARHGEF2Q92974 986 aaKnown RBP16.68■□□□□ 0.26
DDX55-201ENST00000238146 DDX23Q9BUQ8 820 aaKnown RBP16.68■□□□□ 0.26
DDX55-201ENST00000238146 PARVGQ9HBI0 331 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 CIITAP33076 1130 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 GPC5P78333 572 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 SIX1Q15475 284 aaPredicted RBP16.68■□□□□ 0.26
DDX55-201ENST00000238146 VSTM1Q6UX27 236 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 SLC30A10Q6XR72 485 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 CYFIP1Q7L576 1253 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 ZNF720Q7Z2F6 126 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 SLC13A5Q86YT5 568 aaPredicted RBP16.68■□□□□ 0.26
DDX55-201ENST00000238146 CNBD1Q8NA66 436 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 CD101Q93033 1021 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 HSD17B14Q9BPX1 270 aa16.68■□□□□ 0.26
DDX55-201ENST00000238146 CDC42EP4Q9H3Q1 356 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms