RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 A0A1W2PRG0 241 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 GH2P01242 217 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 CCDC172P0C7W6 258 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 COPB2P35606 906 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 MAGOHP61326 146 aaKnown RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 IFT88Q13099 833 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 PRPF4BQ13523 1007 aaKnown RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 FMNL3Q8IVF7 1028 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 ALG3Q92685 438 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 MAGOHBQ96A72 148 aaKnown RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 FAM170AA1A519 330 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 ANKRD62A6NC57 917 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 RPS12P25398 132 aaKnown RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 QPCTQ16769 361 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 ODF2Q5BJF6 829 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 PHLDB3Q6NSJ2 640 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 LMO3Q8TAP4 145 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 NAP1L3Q99457 506 aaPredicted RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 ERP44Q9BS26 406 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 EPB41L4BQ9H329 900 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 DDX20Q9UHI6 824 aaKnown RBP16.79■□□□□ 0.28
CTSD-201ENST00000236671 ODF2LQ9ULJ1 636 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 ATP8A1Q9Y2Q0 1164 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 DAAM1Q9Y4D1 1078 aa16.79■□□□□ 0.28
CTSD-201ENST00000236671 SMCHD1A6NHR9 2005 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 GOLGA6L10A0A0M3HER8 536 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 C5orf60A6NFR6 353 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 LRRN2O75325 713 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 VCAM1P19320 739 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 TNFAIP3P21580 790 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 HADHBP55084 474 aaKnown RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 ACTN3Q08043 901 aaPredicted RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 BFSP1Q12934 665 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 ARHGAP44Q17R89 818 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 RNF187Q5TA31 235 aaPredicted RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 ADAT2Q7Z6V5 191 aaKnown RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 RAPGEF5Q92565 580 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 STRA6Q9BX79 667 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 FOXN3O00409 490 aaPredicted RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 EIF3BP55884 814 aaKnown RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 FKBP1AP62942 108 aaKnown RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 SLC9A9Q8IVB4 645 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 BANK1Q8NDB2 785 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 GLG1Q92896 1179 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 NACC1Q96RE7 527 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 SEPT11Q9NVA2 429 aaKnown RBP16.78■□□□□ 0.28
CTSD-201ENST00000236671 KCND2Q9NZV8 630 aa16.78■□□□□ 0.28
CTSD-201ENST00000236671 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 FAM187AA6NFU0 413 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 H0YHG0 523 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 GAS7O60861 476 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 CFBP00751 764 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 MUTP22033 750 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 RFX1P22670 979 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 DHX34Q14147 1143 aaKnown RBP16.77■□□□□ 0.28
CTSD-201ENST00000236671 PLCB4Q15147 1175 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 DLGAP5Q15398 846 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 SWT1Q5T5J6 900 aaKnown RBP16.77■□□□□ 0.28
CTSD-201ENST00000236671 ZDHHC24Q6UX98 284 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 JAMLQ86YT9 394 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 CEP89Q96ST8 783 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.28
CTSD-201ENST00000236671 NUDT17P0C025 328 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 UBXN2AP68543 259 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 MAPK7Q13164 816 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 DRP2Q13474 957 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 BYSLQ13895 437 aaKnown RBP16.76■□□□□ 0.27
CTSD-201ENST00000236671 ANGEL2Q5VTE6 544 aaKnown RBP16.76■□□□□ 0.27
CTSD-201ENST00000236671 MAP1SQ66K74 1059 aaPredicted RBP16.76■□□□□ 0.27
CTSD-201ENST00000236671 C11orf63Q6NUN7 778 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 RHOT2Q8IXI1 618 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 UNC45AQ9H3U1 944 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 VEZTQ9HBM0 779 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 ADARB2Q9NS39 739 aaKnown RBP16.76■□□□□ 0.27
CTSD-201ENST00000236671 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTSD-201ENST00000236671 GGA3Q9NZ52 723 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 CENPFP49454 3210 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 KIF3CO14782 793 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 KIAA0391O15091 583 aaKnown RBP16.76■□□□□ 0.27
CTSD-201ENST00000236671 EXOC3O60645 756 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 USP8P40818 1118 aa16.76■□□□□ 0.27
CTSD-201ENST00000236671 STAT2P52630 851 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms