RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 SELENONQ9NZV5 590 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 DAPK2Q9UIK4 370 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 C5orf60A6NFR6 353 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 RARAP10276 462 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CDH3P22223 829 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CYP7A1P22680 504 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CDK7P50613 346 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 PDCD4Q53EL6 469 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 SCAIQ8N9R8 606 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CYP4F11Q9HBI6 524 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 RRN3Q9NYV6 651 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ADCY6O43306 1168 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ITGA2BP08514 1039 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 FAM58BPP0C7Q3 252 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 BNIP1Q12981 228 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 KRT72Q14CN4 511 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ACTRT1Q8TDG2 376 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 INTS13Q9NVM9 706 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 RAB20Q9NX57 234 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ENTPD5O75356 428 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 PYGMP11217 842 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 C6orf89Q6UWU4 347 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 SIX6OS1Q8N1H7 587 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 RSAD2Q8WXG1 361 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 TBC1D10AQ9BXI6 508 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 MAK16Q9BXY0 300 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 MRPL40Q9NQ50 206 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 PICK1Q9NRD5 415 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ZBTB21Q9ULJ3 1066 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 DMTF1Q9Y222 760 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 USTQ9Y2C2 406 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CAB39Q9Y376 341 aaPredicted RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ADGRA3Q8IWK6 1321 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ACTN1P12814 892 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 EIF4BP23588 611 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 PDIA5Q14554 519 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 PLEKHA7Q6IQ23 1121 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 MTDHQ86UE4 582 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 DQX1Q8TE96 717 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 ANKS1AQ92625 1134 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 SDCCAG3Q96C92 435 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 TIPINQ9BVW5 301 aa13.69□□□□□ -0.22
VAMP4-201ENST00000236192 MRPS26Q9BYN8 205 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 UPF3AQ9H1J1 476 aaKnown RBP13.69□□□□□ -0.22
VAMP4-201ENST00000236192 TOM1L1O75674 476 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 CAPN1P07384 714 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 BLVRAP53004 296 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 TUBA1BP68363 451 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ITGA7Q13683 1181 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 TUBA1AQ71U36 451 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 PTTG2Q9NZH5 202 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 CD209Q9NNX6 404 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 TRIM33Q9UPN9 1127 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 COPEO14579 308 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ASMTLO95671 621 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 LYNP07948 512 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 OASLQ15646 514 aaKnown RBP13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ADSSL1Q8N142 457 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 TTC8Q8TAM2 541 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 COX4I2Q96KJ9 171 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 HEY2Q9UBP5 337 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 MAP3K15Q6ZN16 1313 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ERVK-9P63128 1117 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ZNF211Q13398 564 aaPredicted RBP13.68□□□□□ -0.22
VAMP4-201ENST00000236192 CALCRLQ16602 461 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 KLHL38Q2WGJ6 581 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
VAMP4-201ENST00000236192 BIRC5O15392 142 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 LPXNO60711 386 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 FDPSP14324 419 aaKnown RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 RAB15P59190 212 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 RGS21Q2M5E4 152 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 FLCNQ8NFG4 579 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 JADE3Q92613 823 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 MAF1Q9H063 256 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 HERC5Q9UII4 1024 aaKnown RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 PLA2R1Q13018 1463 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 CFAP99D6REC4 459 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 BFSP1Q12934 665 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 MTFR1Q15390 333 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 TRAF7Q6Q0C0 670 aa13.67□□□□□ -0.22
VAMP4-201ENST00000236192 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 METTL22Q9BUU2 404 aaPredicted RBP13.67□□□□□ -0.22
VAMP4-201ENST00000236192 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms