RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 PPP1R37O75864 691 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 ACRP10323 421 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 BMP6P22004 513 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 HOXA11P31270 313 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 RFC2P35250 354 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 HOXD13P35453 343 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 NCBP1Q09161 790 aaKnown RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 STRN3Q13033 797 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 PAK2Q13177 524 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 PRPF4BQ13523 1007 aaKnown RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 MORC3Q14149 939 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 PCBP1Q15365 356 aaKnown RBP eCLIP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 AMHR2Q16671 573 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 C16orf59Q7L2K0 433 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 EPM2AIP1Q7L775 607 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 KIAA0895Q8NCT3 520 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 SCFD1Q8WVM8 642 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 SEPT8Q92599 483 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 LBHD1Q9BQE6 289 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 IFIH1Q9BYX4 1025 aaKnown RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 PRMT7Q9NVM4 692 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-201ENST00000235958 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
HMGCL-201ENST00000235958 SIP14410 1827 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ENPP3O14638 875 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 B4GALT5O43286 388 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 TSPAN1O60635 241 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ERLIN2O94905 339 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 EDN1P05305 212 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 PRKCBP05771 671 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ARF4P18085 180 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ABCD1P33897 745 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 PRCPP42785 496 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 FPGSQ05932 587 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ALCAMQ13740 583 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ZNF658Q5TYW1 1059 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 STXBP4Q6ZWJ1 553 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 PRIMPOLQ96LW4 560 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ACCSQ96QU6 501 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 ACO2Q99798 780 aaKnown RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 TARS2Q9BW92 718 aaKnown RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 GTPBP4Q9BZE4 634 aaKnown RBP11.17□□□□□ -0.62
HMGCL-201ENST00000235958 IKZF4Q9H2S9 585 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 IL23AQ9NPF7 189 aa11.17□□□□□ -0.62
HMGCL-201ENST00000235958 PHLPP2Q6ZVD8 1323 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 H0YGN5 161 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 EIF3DO15371 548 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 MGEA5O60502 916 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 LETM1O95202 739 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 ZSCAN20P17040 1043 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 AXLP30530 894 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 EPHB4P54760 987 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 PPIGQ13427 754 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 IKBKEQ14164 716 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 DSC3Q14574 896 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 KNOP1Q1ED39 458 aaKnown RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 CDR2LQ86X02 465 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 NELFCDQ8IXH7 590 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 TRIML1Q8N9V2 468 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 HVCN1Q96D96 273 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 ZBTB45Q96K62 511 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 ADAM2Q99965 735 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 MRPL4Q9BYD3 311 aaKnown RBP11.16□□□□□ -0.62
HMGCL-201ENST00000235958 TMEM206Q9H813 350 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 CHST12Q9NRB3 414 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
HMGCL-201ENST00000235958 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 FGBP02675 491 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
HMGCL-201ENST00000235958 NLRP12P59046 1061 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 BMT2Q1RMZ1 405 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 TMEM132AQ24JP5 1023 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 TMEM240Q5SV17 173 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 ATF7IP2Q5U623 682 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 EEF1DP3Q658K8 133 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 NOTUMQ6P988 496 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 CNKSR3Q6P9H4 555 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 ZPBP2Q6X784 338 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 FAM43BQ6ZT52 329 aaPredicted RBP11.15□□□□□ -0.62
HMGCL-201ENST00000235958 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 MAP4K3Q8IVH8 894 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 ADSSL1Q8N142 457 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
HMGCL-201ENST00000235958 APBB2Q92870 758 aa11.15□□□□□ -0.62
HMGCL-201ENST00000235958 BICD1Q96G01 975 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms