RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 TRIM10Q9UDY6 481 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 UBE3AQ05086 875 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 GPS1Q13098 491 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 DDX17Q92841 729 aaKnown RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 ADGRA3Q8IWK6 1321 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 TSPAN9O75954 239 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 LCA5LO95447 670 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 PSMC3P17980 439 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 SIX5Q8N196 739 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 CALML6Q8TD86 181 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 ACAP3Q96P50 834 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 CHP1Q99653 195 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 PDE8AO60658 829 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 SASH1O94885 1247 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 CFBP00751 764 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 PLOD1Q02809 727 aaPredicted RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 NR1I3Q14994 352 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 MAGED2Q9UNF1 606 aaPredicted RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 DCTN2Q13561 401 aaKnown RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 GCOM2Q9BZD3 368 aaPredicted RBP12.4□□□□□ -0.42
PCDH12-201ENST00000231484 FAM129AQ9BZQ8 928 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 ARHGEF10LQ9HCE6 1279 aa12.4□□□□□ -0.42
PCDH12-201ENST00000231484 DUOX2Q9NRD8 1548 aa12.4□□□□□ -0.43
PCDH12-201ENST00000231484 DENND4BO75064 1496 aaPredicted RBP12.4□□□□□ -0.43
PCDH12-201ENST00000231484 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.43
PCDH12-201ENST00000231484 CLK1P49759 484 aaKnown RBP12.4□□□□□ -0.43
PCDH12-201ENST00000231484 DEPDC1Q5TB30 811 aa12.4□□□□□ -0.43
PCDH12-201ENST00000231484 AIFM3Q96NN9 605 aa12.4□□□□□ -0.43
PCDH12-201ENST00000231484 TMEM165Q9HC07 324 aa12.4□□□□□ -0.43
PCDH12-201ENST00000231484 MAST3O60307 1309 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 TRIM25Q14258 630 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ZNF786Q8N393 782 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 APOL6Q9BWW8 343 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 KCTD21Q4G0X4 260 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 RASGRP4Q8TDF6 673 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 MRPS26Q9BYN8 205 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 CASP1P29466 404 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 RUNX1T1Q06455 604 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 LPCAT2Q7L5N7 544 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ZNF564Q8TBZ8 553 aaPredicted RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 USP17L21D6R901 530 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 PIK3R2O00459 728 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 UBOX5O94941 541 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 TTLL1O95922 423 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 GSTT1P30711 240 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 RFFLQ8WZ73 363 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 TMEM206Q9H813 350 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 DDX18Q9NVP1 670 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 TRPM2O94759 1503 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ASAP2O43150 1006 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ENO3P13929 434 aaPredicted RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 CDC27P30260 824 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ARL4AP40617 200 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 UBE3CQ15386 1083 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 OASLQ15646 514 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 FUKQ8N0W3 1084 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 PPP2R3CQ969Q6 453 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 RXFP1Q9HBX9 757 aa12.39□□□□□ -0.43
PCDH12-201ENST00000231484 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 CORO1CQ9ULV4 474 aaPredicted RBP12.39□□□□□ -0.43
PCDH12-201ENST00000231484 KRT76Q01546 638 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 CAPRIN1Q14444 709 aaKnown RBP12.38□□□□□ -0.43
PCDH12-201ENST00000231484 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 USP33Q8TEY7 942 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 EYA3Q99504 573 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 TEKT3Q9BXF9 490 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
PCDH12-201ENST00000231484 DNALI1O14645 258 aaPredicted RBP12.38□□□□□ -0.43
PCDH12-201ENST00000231484 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 RHOBTB1O94844 696 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 GOLGA8HP0CJ92 632 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 ITIH2P19823 946 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 MXI1P50539 228 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
PCDH12-201ENST00000231484 HABP4Q5JVS0 413 aaKnown RBP12.38□□□□□ -0.43
PCDH12-201ENST00000231484 CDH24Q86UP0 819 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms