RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 USP17L20D6RJB6 530 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 MARCKSL1P49006 195 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 CCNHP51946 323 aaPredicted RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 GABPAQ06546 454 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 USP17L24Q0WX57 530 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 PICALMQ13492 652 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 KIF22Q14807 665 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 LRRC14Q15048 493 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 CDCA2Q69YH5 1023 aaPredicted RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 NAIF1Q69YI7 327 aaPredicted RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 DPP8Q6V1X1 898 aaPredicted RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 TRMT10CQ7L0Y3 403 aaKnown RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 DYDC1Q8WWB3 177 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 BCAS3Q9H6U6 928 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 OLFML3Q9NRN5 406 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 TMEM120BA0PK00 339 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 A8MUI8 341 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 USP17L10C9JJH3 530 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 SMNDC1O75940 238 aaKnown RBP eCLIP15.06■□□□□ 0
SCNN1A-201ENST00000228916 MSH2P43246 934 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 PEX5P50542 639 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 SPATA21Q7Z572 469 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 ERICH1Q86X53 443 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 KIF2BQ8N4N8 673 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 ERMNQ8TAM6 284 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 CRYGNQ8WXF5 182 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 SPDL1Q96EA4 605 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
SCNN1A-201ENST00000228916 SERPINB12Q96P63 405 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 MKNK1Q9BUB5 465 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 ANO3Q9BYT9 981 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 GLT8D2Q9H1C3 349 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
SCNN1A-201ENST00000228916 FOCADQ5VW36 1801 aa15.05■□□□□ 0
SCNN1A-201ENST00000228916 LIN7AO14910 233 aaPredicted RBP15.05■□□□□ -0
SCNN1A-201ENST00000228916 FITM2Q8N6M3 262 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 CKAP2Q8WWK9 683 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 ARHGEF2Q92974 986 aaKnown RBP15.05■□□□□ -0
SCNN1A-201ENST00000228916 APEX2Q9UBZ4 518 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 PNMA3Q9UL41 463 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 UFL1O94874 794 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 TTLL1O95922 423 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 IL1R1P14778 569 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 COILP38432 576 aaPredicted RBP15.05■□□□□ -0
SCNN1A-201ENST00000228916 CTTNQ14247 550 aaKnown RBP15.05■□□□□ -0
SCNN1A-201ENST00000228916 GPATCH4Q5T3I0 446 aaKnown RBP15.05■□□□□ -0
SCNN1A-201ENST00000228916 NUGGCQ68CJ6 796 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 C15orf52Q6ZUT6 534 aaKnown RBP15.05■□□□□ -0
SCNN1A-201ENST00000228916 RPS6KC1Q96S38 1066 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 RUSC1Q9BVN2 902 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 ADAM22Q9P0K1 906 aa15.05■□□□□ -0
SCNN1A-201ENST00000228916 GAKO14976 1311 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 TBX3O15119 743 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 EIF3DO15371 548 aaKnown RBP eCLIP15.04■□□□□ -0
SCNN1A-201ENST00000228916 CCNB1P14635 433 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 CREB1P16220 341 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 SKIV2L2P42285 1042 aaKnown RBP15.04■□□□□ -0
SCNN1A-201ENST00000228916 LONRF1Q17RB8 773 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 CBWD6Q4V339 395 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 CBWD3Q5JTY5 395 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 CBWD5Q5RIA9 395 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
SCNN1A-201ENST00000228916 KCTD1Q719H9 257 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
SCNN1A-201ENST00000228916 TBCAO75347 108 aaKnown RBP15.04■□□□□ -0
SCNN1A-201ENST00000228916 C11orf91Q3C1V1 193 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 MGARPQ8TDB4 240 aa15.04■□□□□ -0
SCNN1A-201ENST00000228916 CDC42EP4Q9H3Q1 356 aaKnown RBP15.04■□□□□ -0
SCNN1A-201ENST00000228916 TP73O15350 636 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 WFS1O76024 890 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 PDE6BP35913 854 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 MAP2K1Q02750 393 aaPredicted RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 RRP1BQ14684 758 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 SIX1Q15475 284 aaPredicted RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 SLC15A2Q16348 729 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 MIS18BP1Q6P0N0 1132 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 ARMC2Q8NEN0 867 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 CD101Q93033 1021 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 AGPAT1Q99943 283 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 IKZF4Q9H2S9 585 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 AAASQ9NRG9 546 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 USP40Q9NVE5 1235 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 CORO1CQ9ULV4 474 aaPredicted RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 PASKQ96RG2 1323 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 ATP2A2P16615 1042 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 GAP43P17677 238 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 BLMHQ13867 455 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 FAM98CQ17RN3 349 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 ANKRD20A2Q5SQ80 823 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 ANKRD20A1Q5TYW2 823 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 ANKRD20A3Q5VUR7 823 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 OTUD6AQ7L8S5 288 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 C12orf50Q8NA57 414 aaPredicted RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 LENG9Q96B70 501 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 DDX23Q9BUQ8 820 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 BHMT2Q9H2M3 363 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms