RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ARHGAP44Q17R89 818 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 FAM160B1Q5W0V3 765 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 C6orf89Q6UWU4 347 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 TAOK1Q7L7X3 1001 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 LONP2Q86WA8 852 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 SCYL3Q8IZE3 742 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 CCSER1Q9C0I3 900 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 HOMER3Q9NSC5 361 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
CCND1-201ENST00000227507 HARSP12081 509 aaKnown RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 CAP2P40123 477 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 ZNF662Q6ZS27 426 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 GPBP1Q86WP2 473 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 CCT6BQ92526 530 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 FRMD4BQ9Y2L6 1034 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 CALCOCO2Q13137 446 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 SETDB1Q15047 1291 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 TTBK2Q6IQ55 1244 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 ERICH1Q86X53 443 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 CD302Q8IX05 232 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 INPP4AQ96PE3 977 aaPredicted RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 ACAD9Q9H845 621 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 NRBP2Q9NSY0 501 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 M0QZ92 97 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 NR2F2P24468 414 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 GBP1P32455 592 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 XRCC4Q13426 336 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 FIGNQ5HY92 759 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 AGBL2Q5U5Z8 902 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 STMN4Q9H169 189 aaPredicted RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 SLC9A1P19634 815 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 PDE6CP51160 858 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 EXOC3L4Q17RC7 722 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 MUM1Q2TAK8 710 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 APOBEC3HQ6NTF7 200 aaKnown RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 LDHDQ86WU2 507 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 EPS8L3Q8TE67 593 aaKnown RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 ARHGEF2Q92974 986 aaKnown RBP12.36□□□□□ -0.43
CCND1-201ENST00000227507 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 BATF3Q9NR55 127 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 RPS6KL1Q9Y6S9 549 aa12.36□□□□□ -0.43
CCND1-201ENST00000227507 CRYBG1Q9Y4K1 1723 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 F8VZ95 297 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 ECEL1O95672 775 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 INHBEP58166 350 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 GRIK3Q13003 919 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 NBPF12Q5TAG4 269 aaPredicted RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 FKBP1CQ5VVH2 108 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 TMC3Q7Z5M5 1100 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 P3H4Q92791 437 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 FAM129AQ9BZQ8 928 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 CUEDC2Q9H467 287 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 NKIRAS1Q9NYS0 192 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 CTTNBP2NLQ9P2B4 639 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 LARSQ9P2J5 1176 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 ARMCX3Q9UH62 379 aaPredicted RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 FUT2Q10981 343 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 MTA1Q13330 715 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 NPY5RQ15761 445 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 SEPT7Q16181 437 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 CAPN12Q6ZSI9 719 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 UNC13DQ70J99 1090 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 MREGQ8N565 214 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 ATXN2Q99700 1313 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 GCNT3O95395 438 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 RAD23BP54727 409 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 EIF3BP55884 814 aaKnown RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 TAF1CQ15572 869 aaPredicted RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 TRIP13Q15645 432 aaPredicted RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 AMIGO3Q86WK7 504 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 BAP1Q92560 729 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 ADAM33Q9BZ11 813 aa12.35□□□□□ -0.43
CCND1-201ENST00000227507 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
CCND1-201ENST00000227507 CCDC188H7C350 402 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 LGR5O75473 907 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 USP11P51784 963 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms