RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ENTPD5O75356 428 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 GFPT2O94808 682 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 UCHL3P15374 230 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 KCNJ1P48048 391 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 GALCP54803 685 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 SLMAPQ14BN4 828 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
SF1-201ENST00000227503 ZC3H3Q8IXZ2 948 aaKnown RBP15.16■□□□□ 0.02
SF1-201ENST00000227503 SCFD1Q8WVM8 642 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 ALG3Q92685 438 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 NT5C3AQ9H0P0 336 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 GRHL1Q9NZI5 618 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 SERPINB13Q9UIV8 391 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 KIAA1024Q9UPX6 916 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 SH3BP1Q9Y3L3 701 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 DDX3XO00571 662 aaKnown RBP eCLIP15.16■□□□□ 0.026e-44■■■■□ 22.7
SF1-201ENST00000227503 CES2O00748 559 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 PEX11AO75192 247 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 H2AFZP0C0S5 128 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 PLA2G4BP0C869 781 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 ZNF131P52739 623 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 H2AFVQ71UI9 128 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 PAIP2Q9BPZ3 127 aaKnown RBP15.16■□□□□ 0.02
SF1-201ENST00000227503 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
SF1-201ENST00000227503 AMFRQ9UKV5 643 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 KDM3AQ9Y4C1 1321 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 LTBP4Q8N2S1 1624 aa15.16■□□□□ 0.02
SF1-201ENST00000227503 SMAPO00193 183 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 LUC7L3O95232 432 aaKnown RBP15.15■□□□□ 0.02
SF1-201ENST00000227503 GNA14O95837 355 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 SERPINB2P05120 415 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 GNAZP19086 355 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 RANBP1P43487 201 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 PTENP60484 403 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 LAMB3Q13751 1172 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 TBC1D25Q3MII6 688 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 KCTD1Q719H9 257 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 SPOCK2Q92563 424 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 ARHGEF2Q92974 986 aaKnown RBP15.15■□□□□ 0.02
SF1-201ENST00000227503 PPP1R12CQ9BZL4 782 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 SEPT11Q9NVA2 429 aaKnown RBP15.15■□□□□ 0.02
SF1-201ENST00000227503 PFASO15067 1338 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 POTECB2RU33 542 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 C6orf229H3BNL8 230 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 MARCH6O60337 910 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 RTN3O95197 1032 aaPredicted RBP15.15■□□□□ 0.02
SF1-201ENST00000227503 AGTP01019 485 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 GYS1P13807 737 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 HOXA10P31260 410 aaPredicted RBP15.15■□□□□ 0.02
SF1-201ENST00000227503 TRAF1Q13077 416 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 GPATCH4Q5T3I0 446 aaKnown RBP15.15■□□□□ 0.02
SF1-201ENST00000227503 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 CCDC65Q8IXS2 484 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 ZDHHC14Q8IZN3 488 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 CERS5Q8N5B7 392 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 SLC35G2Q8TBE7 412 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 HES6Q96HZ4 224 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 IFT74Q96LB3 600 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 BCAS3Q9H6U6 928 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 LRRC4BQ9NT99 713 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
SF1-201ENST00000227503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.14■□□□□ 0.01
SF1-201ENST00000227503 TCRBV7S2A1N4TA0A589 114 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 RIPK2O43353 540 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 FERP16591 822 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 CYP11B2P19099 503 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 GRIPAP1Q4V328 841 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 C6orf118Q5T5N4 469 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 TTC27Q6P3X3 843 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 CPNE8Q86YQ8 564 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 ARHGEF26Q96DR7 871 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 TGS1Q96RS0 853 aaKnown RBP15.14■□□□□ 0.01
SF1-201ENST00000227503 NUDCD1Q96RS6 583 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 EPAS1Q99814 870 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 MYLK2Q9H1R3 596 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 SUCLA2Q9P2R7 463 aaPredicted RBP15.14■□□□□ 0.01
SF1-201ENST00000227503 ARL2BPQ9Y2Y0 163 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 ARFGEF1Q9Y6D6 1849 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L15C9J2P7 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L13C9JLJ4 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L11C9JVI0 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L18D6R9N7 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L22D6RA61 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L17D6RBQ6 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L19D6RCP7 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L20D6RJB6 530 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
SF1-201ENST00000227503 EPHB2P29323 1055 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 ERFP50548 548 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 CASP5P51878 434 aa15.14■□□□□ 0.01
SF1-201ENST00000227503 USP17L24Q0WX57 530 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms