RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 NUP62CLQ9H1M0 184 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 TMEM161AQ9NX61 479 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 SRPRBQ9Y5M8 271 aaKnown RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 PHIPQ8WWQ0 1821 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 XYLBO75191 536 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 MAFO75444 373 aaPredicted RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 PSMD10O75832 226 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 NPTXRO95502 500 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 EOMESO95936 686 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 THP07101 528 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 SMAD3P84022 425 aaKnown RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 ATP2C1P98194 919 aaPredicted RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 MYL7Q01449 175 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 HABP4Q5JVS0 413 aaKnown RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 IPO9Q96P70 1041 aaKnown RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 FAM117AQ9C073 453 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 LMAN2LQ9H0V9 348 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 NKX2-4Q9H2Z4 354 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 SNX25Q9H3E2 840 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 MRPL17Q9NRX2 175 aaKnown RBP5.78□□□□□ -1.48
RUFY3-201ENST00000226328 CEP83Q9Y592 693 aa5.78□□□□□ -1.48
RUFY3-201ENST00000226328 MYO9BQ13459 2157 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 ZNF233A6NK53 670 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 PRRG1O14668 218 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 SLC16A4O15374 487 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 HUS1O60921 280 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 HIP1RO75146 1068 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 ADH1AP07327 375 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 DARSP14868 501 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 DNAJB2P25686 324 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 U2AF2P26368 475 aaKnown RBP eCLIP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 TFAMQ00059 246 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 FAAP100Q0VG06 881 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 ODF2Q5BJF6 829 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 MMS19Q96T76 1030 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.77□□□□□ -1.493e-6■■■■■ 30.2
RUFY3-201ENST00000226328 ZNF576Q9H609 170 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 FAM217BQ9NTX9 383 aaPredicted RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 LARGE1O95461 756 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 LRG1P02750 347 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CCDC192P0DO97 292 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 PLS3P13797 630 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 PLCG1P19174 1290 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 MTIF2P46199 727 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 SARSP49591 514 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 DNM1Q05193 864 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CUL4AQ13619 759 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 SNX17Q15036 470 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 HAUS6Q7Z4H7 955 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 RIPOR3Q96MK2 946 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CERS4Q9HA82 394 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 NGRNQ9NPE2 291 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 TBC1D7Q9P0N9 293 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CGNQ9P2M7 1197 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 COLQQ9Y215 455 aaPredicted RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 E9PMD0 336 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 SLC37A4O43826 429 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CLTAP09496 248 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CCDC172P0C7W6 258 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 DDIT3P35638 169 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 ITGB3BPQ13352 177 aaPredicted RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 MCM6Q14566 821 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 SHHQ15465 462 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 LONRF3Q496Y0 759 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 POP1Q99575 1024 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CCSER1Q9C0I3 900 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 CSRNP2Q9H175 543 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 KDM4CQ9H3R0 1056 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 GJB4Q9NTQ9 266 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 TBX21Q9UL17 535 aa5.77□□□□□ -1.49
RUFY3-201ENST00000226328 UBQLN1Q9UMX0 589 aaKnown RBP5.77□□□□□ -1.49
RUFY3-201ENST00000226328 ZMYM2Q9UBW7 1377 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 PSMD2Q13200 908 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 NOLC1Q14978 699 aaKnown RBP eCLIP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 FBXO47Q5MNV8 452 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 CYP4A22Q5TCH4 519 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 PPP1R13LQ8WUF5 828 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 HERVK_113Q902F9 699 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 RAD54LQ92698 747 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 SH2D3AQ9BRG2 576 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 MED10Q9BTT4 135 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 NIFKQ9BYG3 293 aaKnown RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 MFSD1Q9H3U5 465 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 MMRN2Q9H8L6 949 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 GIT1Q9Y2X7 761 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 MAFBQ9Y5Q3 323 aaPredicted RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 N4BP1O75113 896 aaKnown RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 IL18RAPO95256 599 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 LYPLA2O95372 231 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 PTMAP06454 111 aaKnown RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 RARRES1P49788 294 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 RGS19P49795 217 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 AP3M2P53677 418 aa5.76□□□□□ -1.49
RUFY3-201ENST00000226328 ZNF200P98182 395 aaPredicted RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 CCDC85BQ15834 202 aaPredicted RBP5.76□□□□□ -1.49
RUFY3-201ENST00000226328 ARHGAP15Q53QZ3 475 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms