RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MTA2O94776 668 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 GZMAP12544 262 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 PTENP60484 403 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 POU5F1Q01860 360 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 MAEAQ7L5Y9 396 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 ARHGEF19Q8IW93 802 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 TAAR1Q96RJ0 339 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 PLEKHA4Q9H4M7 779 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 RAVER2Q9HCJ3 691 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 MYOZ2Q9NPC6 264 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 GRIN2DO15399 1336 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 FAM187AA6NFU0 413 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 SRRM3A6NNA2 597 aaPredicted RBP23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 KRT14P02533 472 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 FGGP02679 453 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 ITGA4P13612 1032 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 MXI1P50539 228 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 SMTNP53814 917 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 GPC5P78333 572 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 CXCL9Q07325 125 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 CPXCR1Q8N123 301 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 RPS6KC1Q96S38 1066 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 SENP7Q9BQF6 1050 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 TMBIM4Q9HC24 238 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 BACH1O14867 736 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 LRRN2O75325 713 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 KCNA3P22001 575 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 HSD17B3P37058 310 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 GCLMP48507 274 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 RPS6P62753 249 aaKnown RBP23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 RASA3Q14644 834 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 NBPF9Q3BBW0 867 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 FAM71AQ8IYT1 594 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 UBL4BQ8N7F7 174 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 RNPC3Q96LT9 517 aaKnown RBP23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 C17orf75Q9HAS0 396 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 TAS2R14Q9NYV8 317 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 AMACRQ9UHK6 382 aa23.74■■□□□ 1.39
SMARCD2-201ENST00000225742 FTLP02792 175 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 DPEP1P16444 411 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 MFAP3P55082 362 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 SPP2Q13103 211 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 DHX34Q14147 1143 aaKnown RBP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 PTPROQ16827 1216 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 CIAPIN1Q6FI81 312 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 RUFY4Q6ZNE9 571 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 EFCAB13Q8IY85 973 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 ARFGAP2Q8N6H7 521 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 PDCD2LQ9BRP1 358 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 TMEM117Q9H0C3 514 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 PXMP2Q9NR77 195 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 ZEB2O60315 1214 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 DKC1O60832 514 aaKnown RBP eCLIP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 GGPS1O95749 300 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 EIF2AK2P19525 551 aaKnown RBP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 GTF2H1P32780 548 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 PEX3P56589 373 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 IRX5P78411 483 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 XKR9Q5GH70 373 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 ZNF746Q6NUN9 644 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 RPUSD2Q8IZ73 545 aaKnown RBP23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 TMC2Q8TDI7 906 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 SLC20A1Q8WUM9 679 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 SPIRE2Q8WWL2 714 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 TEPSINQ96N21 525 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 COG5Q9UP83 839 aa23.73■■□□□ 1.39
SMARCD2-201ENST00000225742 SYNGAP1Q96PV0 1343 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 SLC16A4O15374 487 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 MAFGO15525 162 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 BIRC3Q13489 604 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 CEP85LQ5SZL2 805 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 DCAF12L1Q5VU92 463 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 RNF207Q6ZRF8 634 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 USP37Q86T82 979 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 MAP4K3Q8IVH8 894 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 RMDN3Q96TC7 470 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 CTTNBP2NLQ9P2B4 639 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 TBX20Q9UMR3 447 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 COQ4Q9Y3A0 265 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 ALG6Q9Y672 507 aa23.72■■□□□ 1.39
SMARCD2-201ENST00000225742 TISP43B9A030 160 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 H0YGN5 161 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 TTI1O43156 1089 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 MYZAPP0CAP1 466 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 NR1D1P20393 614 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 ZNF280AP59817 542 aaPredicted RBP23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 UGCGQ16739 394 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 OTUD6AQ7L8S5 288 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 PALB2Q86YC2 1186 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 PLEKHO2Q8TD55 490 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 KIFAP3Q92845 792 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 GPRASP2Q96D09 838 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 TRERF1Q96PN7 1200 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 FEZ2Q9UHY8 353 aaPredicted RBP23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 LCMT1Q9UIC8 334 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 NFS1Q9Y697 457 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 FER1L6Q2WGJ9 1857 aa23.71■■□□□ 1.39
SMARCD2-201ENST00000225742 DAPK3O43293 454 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 ERLIN2O94905 339 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms