RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 BRAFP15056 766 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 VCAM1P19320 739 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SCNN1DP51172 638 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 NPEPPSP55786 919 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 PPATQ06203 517 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 KYNUQ16719 465 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SPATA21Q7Z572 469 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 IFT74Q96LB3 600 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 ZNF570Q96NI8 536 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 INTUQ9ULD6 942 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 PITPNM2Q9BZ72 1349 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SMARCA1P28370 1054 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 GTF2IP78347 998 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 TAF11Q15544 211 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
PITRM1-201ENST00000224949 FOXR2Q6PJQ5 311 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SLFN12Q8IYM2 578 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SYT2Q8N9I0 419 aaPredicted RBP13.59□□□□□ -0.23
PITRM1-201ENST00000224949 PFASO15067 1338 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 PASKQ96RG2 1323 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SRCAPQ6ZRS2 3230 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 GJC1P36383 396 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 MSH2P43246 934 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SLMAPQ14BN4 828 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 SHROOM1Q2M3G4 852 aaPredicted RBP13.59□□□□□ -0.23
PITRM1-201ENST00000224949 ZDHHC14Q8IZN3 488 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 ATG4AQ8WYN0 398 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 RMDN2Q96LZ7 410 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 KLHL14Q9P2G3 628 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
PITRM1-201ENST00000224949 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 CCDC189A1A4V9 331 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 CLDN3O15551 220 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 TGFB1I1O43294 461 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 THAP12O43422 761 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 ZNF449Q6P9G9 518 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 INTS8Q75QN2 995 aaKnown RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 FITM2Q8N6M3 262 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 ARHGEF10LQ9HCE6 1279 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 ZNF335Q9H4Z2 1342 aaPredicted RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 PODXLO00592 558 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 ECEL1O95672 775 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 SPATA31C1P0DKV0 1188 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 PTGIRP43119 386 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 RHBDL3P58872 404 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 TCP10Q12799 353 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 HYIQ5T013 277 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 FAM178BQ8IXR5 827 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 NKIRAS1Q9NYS0 192 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 APEX2Q9UBZ4 518 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 PDHA1P08559 390 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 ATP2A2P16615 1042 aaKnown RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 HOXA7P31268 230 aaPredicted RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 CLK2P49760 499 aaKnown RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 RNF207Q6ZRF8 634 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 KIAA0825Q8IV33 1275 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 CCHCR1Q8TD31 782 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 TMEM237Q96Q45 408 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 MXD3Q9BW11 206 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 PKD2L1Q9P0L9 805 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 SERPINB13Q9UIV8 391 aa13.58□□□□□ -0.24
PITRM1-201ENST00000224949 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
PITRM1-201ENST00000224949 RREB1Q92766 1687 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 RPA1P27694 616 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 CHKAP35790 457 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 COILP38432 576 aaPredicted RBP13.57□□□□□ -0.24
PITRM1-201ENST00000224949 GCLMP48507 274 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 GPSM2P81274 684 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 KRT17Q04695 432 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 ZFYVE27Q5T4F4 411 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
PITRM1-201ENST00000224949 KAT5Q92993 513 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 EML1O00423 815 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 RARGP13631 454 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 SSR1P43307 286 aaKnown RBP13.57□□□□□ -0.24
PITRM1-201ENST00000224949 SLC8A3P57103 927 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 SESN3P58005 492 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
PITRM1-201ENST00000224949 RHOT2Q8IXI1 618 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms