RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 NACC1Q96RE7 527 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 EPB41L4BQ9H329 900 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 CTTNBP2NLQ9P2B4 639 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 TMEM110-MUSTN1A8MSY1 372 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 SPDYCQ5MJ68 293 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 FMNL3Q8IVF7 1028 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 LMO3Q8TAP4 145 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 C18orf8Q96DM3 657 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 UBE2TQ9NPD8 197 aaPredicted RBP18.65■□□□□ 0.58
USB1-201ENST00000219281 GOLGA6L7A0A1B0GV03 622 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 C5orf60A6NFR6 353 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 DLG4P78352 724 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 DRP2Q13474 957 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 BYSLQ13895 437 aaKnown RBP18.65■□□□□ 0.58
USB1-201ENST00000219281 DHX34Q14147 1143 aaKnown RBP18.65■□□□□ 0.58
USB1-201ENST00000219281 CCDC174Q6PII3 467 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 OSBPL7Q9BZF2 842 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 UNC45AQ9H3U1 944 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
USB1-201ENST00000219281 ODF2LQ9ULJ1 636 aa18.65■□□□□ 0.58
USB1-201ENST00000219281 KIAA0391O15091 583 aaKnown RBP18.64■□□□□ 0.57
USB1-201ENST00000219281 FTLP02792 175 aaPredicted RBP18.64■□□□□ 0.57
USB1-201ENST00000219281 MAPK7Q13164 816 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 PLCB4Q15147 1175 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 SPRED3Q2MJR0 410 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 ZDHHC24Q6UX98 284 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 CPLX4Q7Z7G2 160 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 HOOK3Q86VS8 718 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 RHOT2Q8IXI1 618 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 CACNA2D3Q8IZS8 1091 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 KRT35Q92764 455 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 TATDN2Q93075 761 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 PCIF1Q9H4Z3 704 aa18.64■□□□□ 0.57
USB1-201ENST00000219281 CNOT10Q9H9A5 744 aaKnown RBP18.64■□□□□ 0.57
USB1-201ENST00000219281 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
USB1-201ENST00000219281 CHORDC1Q9UHD1 332 aaPredicted RBP18.64■□□□□ 0.57
USB1-201ENST00000219281 TLDC2A0PJX2 215 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 HIP1RO75146 1068 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 BCRP11274 1271 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 ECE1P42892 770 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 MARCKSL1P49006 195 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 SETQ01105 290 aaPredicted RBP18.63■□□□□ 0.57
USB1-201ENST00000219281 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 ARHGEF19Q8IW93 802 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 CDAN1Q8IWY9 1227 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 FBXO25Q8TCJ0 367 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 RNF25Q96BH1 459 aaPredicted RBP18.63■□□□□ 0.57
USB1-201ENST00000219281 CCDC114Q96M63 670 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 PABPC3Q9H361 631 aaKnown RBP18.63■□□□□ 0.57
USB1-201ENST00000219281 RASAL2Q9UJF2 1139 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 EMSYQ7Z589 1322 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 POLR2MP0CAP2 368 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 ARP10275 920 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 DRD4P21917 467 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 PTGIRP43119 386 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 STAT2P52630 851 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 SMTNP53814 917 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 DENND2CQ68D51 928 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 NEK9Q8TD19 979 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 ZNF577Q9BSK1 485 aa18.63■□□□□ 0.57
USB1-201ENST00000219281 COL2A1P02458 1487 aaPredicted RBP18.63■□□□□ 0.57
USB1-201ENST00000219281 ARHGEF35A5YM69 484 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 SMIM23A6NLE4 172 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 TISP43B9A030 160 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 DNM1LO00429 736 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 PHF2O75151 1096 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 NUDT17P0C025 328 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 CDR1P51861 262 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 DLGAP5Q15398 846 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 CLUL1Q15846 466 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 ERMARDQ5T6L9 678 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 GKAP1Q5VSY0 366 aaPredicted RBP18.62■□□□□ 0.57
USB1-201ENST00000219281 ZNF746Q6NUN9 644 aaPredicted RBP18.62■□□□□ 0.57
USB1-201ENST00000219281 RPUSD2Q8IZ73 545 aaKnown RBP18.62■□□□□ 0.57
USB1-201ENST00000219281 UBL4BQ8N7F7 174 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 FAM151AQ8WW52 585 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 XPO6Q96QU8 1125 aaKnown RBP18.62■□□□□ 0.57
USB1-201ENST00000219281 LXNQ9BS40 222 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 ACTR5Q9H9F9 607 aaPredicted RBP18.62■□□□□ 0.57
USB1-201ENST00000219281 SLC40A1Q9NP59 571 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 KLC4Q9NSK0 619 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 HERC5Q9UII4 1024 aaKnown RBP18.62■□□□□ 0.57
USB1-201ENST00000219281 UTRNP46939 3433 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 CNTNAP1P78357 1384 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 K7ENM7 598 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 CEP55Q53EZ4 464 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 ANKRD20A8PQ5CZ79 823 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 C11orf63Q6NUN7 778 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 ARMC9Q7Z3E5 817 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 SLC9A9Q8IVB4 645 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 DAW1Q8N136 415 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 PRELID2Q8N945 189 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 ACER1Q8TDN7 264 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 SELENOSQ9BQE4 189 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 STRA6Q9BX79 667 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 GRHL1Q9NZI5 618 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms