RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 FMO5P49326 533 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 MKRN3Q13064 507 aaKnown RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 ALKBH5Q6P6C2 394 aaKnown RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 ARMC9Q7Z3E5 817 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 ANKRD35Q8N283 1001 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 MICALL1Q8N3F8 863 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 ZIC5Q96T25 663 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 LRRC1Q9BTT6 524 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 OLFML3Q9NRN5 406 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 TMOD4Q9NZQ9 345 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 UBIAD1Q9Y5Z9 338 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 KLHL33A6NCF5 533 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 TMEM110-MUSTN1A8MSY1 372 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 CXCL11O14625 94 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 EVI5O60447 810 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 HNRNPH3P31942 346 aaKnown RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 SMC1AQ14683 1233 aaKnown RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 SLC18A3Q16572 532 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 ASTE1Q2TB18 679 aaPredicted RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 NAA35Q5VZE5 725 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 PCNX4Q63HM2 1172 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 IRF2BP2Q7Z5L9 587 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 PALB2Q86YC2 1186 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 RIN2Q8WYP3 895 aaPredicted RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 BICD1Q96G01 975 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 FUT8Q9BYC5 575 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 UBE2TQ9NPD8 197 aaPredicted RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 A1CFQ9NQ94 594 aaKnown RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 DMGDHQ9UI17 866 aaKnown RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 SNX12Q9UMY4 172 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 MYH11P35749 1972 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 ANKRD63C9JTQ0 380 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 CNMDO75829 334 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 APLP1P51693 650 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 GSCP56915 257 aaPredicted RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 MYL7Q01449 175 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 SEZ6Q53EL9 994 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 ANO5Q75V66 913 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 NCAPG2Q86XI2 1143 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 KLHL7Q8IXQ5 586 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 TLR10Q9BXR5 811 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 TSGA10Q9BZW7 698 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 ZNF862O60290 1169 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 KRT13P13646 458 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 MARK3P27448 753 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 PRPF4BQ13523 1007 aaKnown RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 PAPD7Q5XG87 772 aaKnown RBP10.81□□□□□ -0.68
USP11-201ENST00000218348 BRI3BPQ8WY22 251 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 BSNDQ8WZ55 320 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 TMEM143Q96AN5 459 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 SIX2Q9NPC8 291 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 TAS2R14Q9NYV8 317 aa10.81□□□□□ -0.68
USP11-201ENST00000218348 DENND3A2RUS2 1198 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 KCNK3O14649 394 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 PAX7P23759 505 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 USP14P54578 494 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 SRLQ86TD4 932 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 CREG2Q8IUH2 290 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 PPM1KQ8N3J5 372 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 IFT81Q8WYA0 676 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 PI4K2AQ9BTU6 479 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 INTS2Q9H0H0 1204 aaKnown RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 ZNF408Q9H9D4 720 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 METTL14Q9HCE5 456 aaKnown RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 OSGEPQ9NPF4 335 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 ZNF214Q9UL59 606 aaPredicted RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 SLC45A1Q9Y2W3 748 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 C19orf81C9J6K1 198 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 H3BQF6 201 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 FOXN3O00409 490 aaPredicted RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 CAPN15O75808 1086 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 RGS20O76081 388 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 CDK17Q00537 523 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 EPC2Q52LR7 807 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 PHLDB3Q6NSJ2 640 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 STXBP4Q6ZWJ1 553 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 CCDC60Q8IWA6 550 aaPredicted RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 SLC20A1Q8WUM9 679 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 ZBTB10Q96DT7 871 aa10.8□□□□□ -0.68
USP11-201ENST00000218348 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 RBM12Q9NTZ6 932 aaKnown RBP10.8□□□□□ -0.68
USP11-201ENST00000218348 WDR64B1ANS9 1081 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 PGK2P07205 417 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 CALRP27797 417 aaKnown RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 NF2P35240 595 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 STAT1P42224 750 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 SP2Q02086 613 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 BEND6Q5SZJ8 279 aaPredicted RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 C2orf69Q8N8R5 385 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 PLEKHO2Q8TD55 490 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 AP1M1Q9BXS5 423 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 AS3MTQ9HBK9 375 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms