RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IKZF4Q9H2S9 585 aa29.94■■■□□ 2.38
CHMP4B-201ENST00000217402 NBNO60934 754 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 SCP2P22307 547 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 ABCD1P33897 745 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 PRCPP42785 496 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 NLRP12P59046 1061 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 NFX1Q12986 1120 aaKnown RBP29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 PAK2Q13177 524 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 AMHR2Q16671 573 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 DPCR1Q3MIW9 517 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 MAP4K3Q8IVH8 894 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 BICD1Q96G01 975 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 ACCSQ96QU6 501 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 GTPBP4Q9BZE4 634 aaKnown RBP29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 TTLL13PA6NNM8 815 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 TSPAN1O60635 241 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 SYN1P17600 705 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 HOXD13P35453 343 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 PRPF4BQ13523 1007 aaKnown RBP29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 TMEM132AQ24JP5 1023 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 ZNF507Q8TCN5 953 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 ST3GAL5Q9UNP4 418 aa29.93■■■□□ 2.38
CHMP4B-201ENST00000217402 UBE4BO95155 1302 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 ACKR2O00590 384 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 CD44P16070 742 aaKnown RBP29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 GPNMBQ14956 572 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 PPP4R3CPQ6ZMV5 832 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 SYCP3Q8IZU3 236 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 KCNN1Q92952 543 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 ZMYND8Q9ULU4 1186 aaPredicted RBP29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 PADI3Q9ULW8 664 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 SQORQ9Y6N5 450 aa29.92■■■□□ 2.38
CHMP4B-201ENST00000217402 ZMYM2Q9UBW7 1377 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 TYRO3Q06418 890 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 FAM187BQ17R55 369 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 BMT2Q1RMZ1 405 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 DEFB128Q7Z7B8 93 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 GUF1Q8N442 669 aaKnown RBP29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 USP38Q8NB14 1042 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 CPB2Q96IY4 423 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 PRIMPOLQ96LW4 560 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 TARS2Q9BW92 718 aaKnown RBP29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 MRPL4Q9BYD3 311 aaKnown RBP29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 IFIH1Q9BYX4 1025 aaKnown RBP29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 CNTNAP2Q9UHC6 1331 aa29.91■■■□□ 2.38
CHMP4B-201ENST00000217402 HNRNPDLO14979 420 aaKnown RBP29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 GPR182O15218 404 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 CAPN15O75808 1086 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 KIF20AO95235 890 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 STX1AQ16623 288 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 KLHL10Q6JEL2 608 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 ADSSL1Q8N142 457 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 ERVK-5Q9HDB9 667 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 EXOC7Q9UPT5 735 aa29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 PIN4Q9Y237 131 aaKnown RBP29.9■■■□□ 2.38
CHMP4B-201ENST00000217402 STIM1Q13586 685 aa29.89■■■□□ 2.38
CHMP4B-201ENST00000217402 PCBP1Q15365 356 aaKnown RBP eCLIP29.89■■■□□ 2.38
CHMP4B-201ENST00000217402 MFSD5Q6N075 450 aa29.89■■■□□ 2.38
CHMP4B-201ENST00000217402 TMEM206Q9H813 350 aa29.89■■■□□ 2.38
CHMP4B-201ENST00000217402 AGPAT5Q9NUQ2 364 aa29.89■■■□□ 2.38
CHMP4B-201ENST00000217402 SCN5AQ14524 2016 aa29.89■■■□□ 2.38
CHMP4B-201ENST00000217402 PPP1R3GB7ZBB8 358 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 TISP43B9A030 160 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 PARNO95453 639 aaKnown RBP29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 CSF2RAP15509 400 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 ARF4P18085 180 aaPredicted RBP29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 LIG4P49917 911 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 KNOP1Q1ED39 458 aaKnown RBP29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 COBLL1Q53SF7 1204 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 CDR2LQ86X02 465 aaPredicted RBP29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 TMEM199Q8N511 208 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 MLKLQ8NB16 471 aa29.89■■■□□ 2.37
CHMP4B-201ENST00000217402 ANO10Q9NW15 660 aa29.88■■■□□ 2.37
CHMP4B-201ENST00000217402 CCDC192P0DO97 292 aa29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 HOXA11P31270 313 aaPredicted RBP29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 NCBP1Q09161 790 aaKnown RBP29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 ATF7IP2Q5U623 682 aa29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 BADQ92934 168 aa29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 ACO2Q99798 780 aaKnown RBP29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 ANKFY1Q9P2R3 1169 aa29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 CTNND2Q9UQB3 1225 aa29.87■■■□□ 2.37
CHMP4B-201ENST00000217402 PSMA7O14818 248 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 RFC2P35250 354 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 PLEKHG4Q58EX7 1191 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 SLC39A4Q6P5W5 647 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 DBF4BQ8NFT6 615 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 GBP3Q9H0R5 595 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 KCTD10Q9H3F6 313 aa29.86■■■□□ 2.37
CHMP4B-201ENST00000217402 ANKRD63C9JTQ0 380 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 PIGRP01833 764 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 CXCL10P02778 98 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 ZPBP2Q6X784 338 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 FUCA2Q9BTY2 467 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 TMX1Q9H3N1 280 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 PDZD7Q9H5P4 517 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 TGFB1I1O43294 461 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 PPP1R2P41236 205 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 EEF1DP3Q658K8 133 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 NOTUMQ6P988 496 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 C11orf57Q6ZUT1 292 aaPredicted RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms