RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZNF211Q13398 564 aaPredicted RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 RRP1BQ14684 758 aaKnown RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 GLG1Q92896 1179 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 TATDN2Q93075 761 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 CSRNP1Q96S65 589 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 ZSWIM1Q9BR11 485 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 RANBP17Q9H2T7 1088 aaKnown RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 EPB41L4BQ9H329 900 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 UBE2TQ9NPD8 197 aaPredicted RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 CTTNBP2NLQ9P2B4 639 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 MTA2O94776 668 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 CTNNA2P26232 953 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 GKAP1Q5VSY0 366 aaPredicted RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 ZDHHC24Q6UX98 284 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 CCDC13Q8IYE1 715 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 CACNA2D3Q8IZS8 1091 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 DAW1Q8N136 415 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 SEC16BQ96JE7 1060 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 RUNDC3BQ96NL0 473 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
SRP54-201ENST00000216774 TMX2Q9Y320 296 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
SRP54-201ENST00000216774 K7ENM7 598 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 IPO5O00410 1097 aaKnown RBP14.35□□□□□ -0.11
SRP54-201ENST00000216774 MAPK13O15264 365 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 PMM2O15305 246 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 RTN2O75298 545 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 PTGIRP43119 386 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 VAMP7P51809 220 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 EPC2Q52LR7 807 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 ERMARDQ5T6L9 678 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 CC2D2BQ6DHV5 1058 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 ADAT2Q7Z6V5 191 aaKnown RBP14.35□□□□□ -0.11
SRP54-201ENST00000216774 CHURC1Q8WUH1 139 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 TDRD3Q9H7E2 651 aaKnown RBP14.35□□□□□ -0.11
SRP54-201ENST00000216774 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 USP20Q9Y2K6 914 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 PLA2G6O60733 806 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 CAND2O75155 1236 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 ARP10275 920 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 GZMAP12544 262 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 COPB2P35606 906 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 PLTPP55058 493 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 QPCTQ16769 361 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 PRELID2Q8N945 189 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 ACCSQ96QU6 501 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 FAM129AQ9BZQ8 928 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 WNT8AQ9H1J5 351 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 GRHL1Q9NZI5 618 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 SCN9AQ15858 1988 aa14.35□□□□□ -0.11
SRP54-201ENST00000216774 GOLGA6L7A0A1B0GV03 622 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
SRP54-201ENST00000216774 ECE1P42892 770 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 SNRPFP62306 86 aaKnown RBP14.34□□□□□ -0.11
SRP54-201ENST00000216774 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 ARHGEF19Q8IW93 802 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 RDH13Q8NBN7 331 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 FBXO25Q8TCJ0 367 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 C18orf8Q96DM3 657 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 CHMP6Q96FZ7 201 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
SRP54-201ENST00000216774 TMEM109Q9BVC6 243 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
SRP54-201ENST00000216774 MTRF1LQ9UGC7 380 aaKnown RBP14.34□□□□□ -0.11
SRP54-201ENST00000216774 SNX24Q9Y343 169 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 DRD4P21917 467 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 MMP13P45452 471 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 PEX5P50542 639 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 MNAT1P51948 309 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 UBXN2AP68543 259 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 DLG4P78352 724 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 CYP1B1Q16678 543 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 SEL1L2Q5TEA6 688 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 CPLX4Q7Z7G2 160 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 RPUSD2Q8IZ73 545 aaKnown RBP14.34□□□□□ -0.11
SRP54-201ENST00000216774 KRT35Q92764 455 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 DEFB129Q9H1M3 183 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 LRRC4CQ9HCJ2 640 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 DBR1Q9UK59 544 aaKnown RBP14.34□□□□□ -0.11
SRP54-201ENST00000216774 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
SRP54-201ENST00000216774 MYH11P35749 1972 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 RASSF9O75901 435 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 SHBGP04278 402 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 ALAS1P13196 640 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 MCCD1P59942 119 aaPredicted RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 ADCY2Q08462 1091 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 KCTD19Q17RG1 926 aaPredicted RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 LACTB2Q53H82 288 aaPredicted RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 C6orf118Q5T5N4 469 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 FAM71AQ8IYT1 594 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms