RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PTK2Q05397 1052 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 TARBP2Q15633 366 aaKnown RBP18.91■□□□□ 0.62
VRK1-201ENST00000216639 PLPPR4Q7Z2D5 763 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 FBXO16Q8IX29 292 aaPredicted RBP18.91■□□□□ 0.62
VRK1-201ENST00000216639 PDCL2Q8N4E4 241 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 TMEM143Q96AN5 459 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GPR20Q99678 358 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 KIAA1586Q9HCI6 787 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 ADAMTS1Q9UHI8 967 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 DUSP10Q9Y6W6 482 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 IVNS1ABPQ9Y6Y0 642 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 ADGRA3Q8IWK6 1321 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GOLGA8IPA6NC78 632 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GOLGA8JA6NMD2 632 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 STRNO43815 780 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GAS2O43903 313 aaKnown RBP18.91■□□□□ 0.62
VRK1-201ENST00000216639 LGR5O75473 907 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 ARIH2O95376 493 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 TXNP10599 105 aaKnown RBP18.91■□□□□ 0.62
VRK1-201ENST00000216639 LIG4P49917 911 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 SLC26A2P50443 739 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 MXI1P50539 228 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GJB7Q6PEY0 223 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 ABRAQ8N0Z2 381 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GPD1LQ8N335 351 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 ANKRD13CQ8N6S4 541 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 LRRN4CLQ8ND94 238 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 SCFD2Q8WU76 684 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 GOLGA1Q92805 767 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 SAAL1Q96ER3 474 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 FBXL18Q96ME1 805 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 A0A087X0T9 212 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 LRRIQ4A6NIV6 560 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 F8VZ95 297 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 MAFO75444 373 aaPredicted RBP18.9■□□□□ 0.62
VRK1-201ENST00000216639 GFPT2O94808 682 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 FAM228BP0C875 321 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 ZBTB48P10074 688 aaPredicted RBP18.9■□□□□ 0.62
VRK1-201ENST00000216639 GCLMP48507 274 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 AMPD2Q01433 879 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 PPP3CAQ08209 521 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 DRAP1Q14919 205 aaPredicted RBP18.9■□□□□ 0.62
VRK1-201ENST00000216639 PAPD7Q5XG87 772 aaKnown RBP18.9■□□□□ 0.62
VRK1-201ENST00000216639 CBWD2Q8IUF1 395 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 NOX5Q96PH1 765 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 CEP89Q96ST8 783 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 JRKLQ9Y4A0 524 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 SAR1BQ9Y6B6 198 aa18.9■□□□□ 0.62
VRK1-201ENST00000216639 K7ERI5 159 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 ADRB2P07550 413 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 GLRA2P23416 452 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 GTF2H1P32780 548 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 CHMP4BP1P59074 171 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 MKRN3Q13064 507 aaKnown RBP18.89■□□□□ 0.61
VRK1-201ENST00000216639 EPC2Q52LR7 807 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 SLFN12LQ6IEE8 588 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 SLC39A4Q6P5W5 647 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 CCDC62Q6P9F0 684 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 ARMCX2Q7L311 632 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 TRAPPC11Q7Z392 1133 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 ZNF571Q7Z3V5 609 aaPredicted RBP18.89■□□□□ 0.61
VRK1-201ENST00000216639 LMO3Q8TAP4 145 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 ASAP3Q8TDY4 903 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 ATP8B4Q8TF62 1192 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 TCP11Q8WWU5 503 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 BRI3BPQ8WY22 251 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 MFSD14AQ96MC6 490 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 PARK7Q99497 189 aaKnown RBP18.89■□□□□ 0.61
VRK1-201ENST00000216639 JPH2Q9BR39 696 aaPredicted RBP18.89■□□□□ 0.61
VRK1-201ENST00000216639 MORF4L1Q9UBU8 362 aa18.89■□□□□ 0.61
VRK1-201ENST00000216639 AJAP1Q9UKB5 411 aaPredicted RBP18.89■□□□□ 0.61
VRK1-201ENST00000216639 CELF2O95319 508 aaKnown RBP18.88■□□□□ 0.61
VRK1-201ENST00000216639 NAP1L1P55209 391 aaKnown RBP18.88■□□□□ 0.61
VRK1-201ENST00000216639 BMS1Q14692 1282 aaKnown RBP18.88■□□□□ 0.61
VRK1-201ENST00000216639 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 HSDL1Q3SXM5 330 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 KRT39Q6A163 491 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 PARD3BQ8TEW8 1205 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 SMARCAD1Q9H4L7 1026 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 TMEM134Q9H6X4 195 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 RRAGCQ9HB90 399 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 DIS3Q9Y2L1 958 aaKnown RBP18.88■□□□□ 0.61
VRK1-201ENST00000216639 ATP8B3O60423 1300 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 ZNF233A6NK53 670 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 ENC1O14682 589 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 EVI5O60447 810 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 MOCS3O95396 460 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 PIGRP01833 764 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 ATP1A1P05023 1023 aaKnown RBP18.88■□□□□ 0.61
VRK1-201ENST00000216639 ADORA2AP29274 412 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 CYP24A1Q07973 514 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 NAB2Q15742 525 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 KIAA0753Q2KHM9 967 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 C1orf220Q5T0J3 134 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 IER5Q5VY09 327 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 SPRYD7Q5W111 196 aa18.88■□□□□ 0.61
VRK1-201ENST00000216639 TAS1R3Q7RTX0 852 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms