RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 PI4K2AQ9BTU6 479 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 MOV10L1Q9BXT6 1211 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 SAMD15Q9P1V8 674 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 IGKV6D-41A0A0C4DH26 115 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 CLCN3P51790 818 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 EPHB4P54760 987 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 IFRD2Q12894 506 aaPredicted RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 E2F4Q16254 413 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 ZBTB8OSQ8IWT0 167 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 C4orf32Q8N8J7 132 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 CDHR1Q96JP9 859 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 FAM118BQ9BPY3 351 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 DAAM1Q9Y4D1 1078 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 AKAP11Q9UKA4 1901 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 CNTNAP1P78357 1384 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 MYO1FO00160 1098 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 GJB1P08034 283 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 NSFP46459 744 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 OR2W6PQ8NHA6 318 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 MTMR9Q96QG7 549 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 RBM12Q9NTZ6 932 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 A0A087X0T9 212 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 FZD9O00144 591 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 ACSL3O95573 720 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 C6orf222P0C671 652 aaPredicted RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 FAM228BP0C875 321 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 TCF7P36402 384 aaPredicted RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 MDM2Q00987 491 aaPredicted RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 SMAD1Q15797 465 aaKnown RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 BRDTQ58F21 947 aaPredicted RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 CDKAL1Q5VV42 579 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 RUFY4Q6ZNE9 571 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 OTOP1Q7RTM1 612 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 GIMAP7Q8NHV1 300 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 SLC30A5Q8TAD4 765 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 L2HGDHQ9H9P8 463 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 FBXO40Q9UH90 709 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 POC1B-GALNT4F8VUJ3 575 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 ZNF286BP0CG31 522 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 NT5C2P49902 561 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 GPRC5AQ8NFJ5 357 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 MSTO1Q9BUK6 570 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 TARS2Q9BW92 718 aaKnown RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 TTLL3Q9Y4R7 772 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
CHPF2-201ENST00000035307 KRT14P02533 472 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 GAP43P17677 238 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 GIT2Q14161 759 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 IQCDQ96DY2 449 aa12.98□□□□□ -0.33
CHPF2-201ENST00000035307 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 MAPK4P31152 587 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 PTGER2P43116 358 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 ANKS4BQ8N8V4 417 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 RAB17Q9H0T7 212 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 PORCNQ9H237 461 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 PDGFCQ9NRA1 345 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 NKIRAS1Q9NYS0 192 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 SNX12Q9UMY4 172 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 ZSCAN5CA6NGD5 496 aaPredicted RBP12.97□□□□□ -0.33
CHPF2-201ENST00000035307 THAP12O43422 761 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 FGFR4P22455 802 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 CYP2C19P33261 490 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 FSTL1Q12841 308 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
CHPF2-201ENST00000035307 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
CHPF2-201ENST00000035307 PLCB1Q9NQ66 1216 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 DMGDHQ9UI17 866 aaKnown RBP12.97□□□□□ -0.33
CHPF2-201ENST00000035307 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 UCHL3P15374 230 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 UGCGQ16739 394 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
CHPF2-201ENST00000035307 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 ATP6V0A4Q9HBG4 840 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
CHPF2-201ENST00000035307 DAPK3O43293 454 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 FTLP02792 175 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 JAK3P52333 1124 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 GTF2A1P52655 376 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 PTK2Q05397 1052 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 TTLL4Q14679 1199 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 CTAGE3PQ8IX95 158 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms