RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 PAPD7Q5XG87 772 aaKnown RBP15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 C2orf69Q8N8R5 385 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 RDH13Q8NBN7 331 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 PLEKHO2Q8TD55 490 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 AJAP1Q9UKB5 411 aaPredicted RBP15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 NENFQ9UMX5 172 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 TFR2Q9UP52 801 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 ADRB2P07550 413 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 SOX5P35711 763 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 DLG4P78352 724 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 PTK2Q05397 1052 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 TTLL4Q14679 1199 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 NAA30Q147X3 362 aaPredicted RBP15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 SPRYD7Q5W111 196 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 EEPD1Q7L9B9 569 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 USP37Q86T82 979 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 CEP112Q8N8E3 955 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 LRRN4CLQ8ND94 238 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 TRIM58Q8NG06 486 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 ASAP3Q8TDY4 903 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 ATP8B4Q8TF62 1192 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 SCFD2Q8WU76 684 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 TMEM134Q9H6X4 195 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 KIAA1586Q9HCI6 787 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 DNAJC12Q9UKB3 198 aa15.57■□□□□ 0.08
RTFDC1-201ENST00000023939 A0A087X0T9 212 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 RBM47A0AV96 593 aaKnown RBP15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 BTNL10A8MVZ5 291 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 F8VZ95 297 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 CCDC172P0C7W6 258 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 FAM228BP0C875 321 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 WDR78Q5VTH9 848 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 TRAPPC11Q7Z392 1133 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 ZNF571Q7Z3V5 609 aaPredicted RBP15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 CBWD2Q8IUF1 395 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 FBXO16Q8IX29 292 aaPredicted RBP15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 DHX37Q8IY37 1157 aaKnown RBP15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 PARD3BQ8TEW8 1205 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 TMEM143Q96AN5 459 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 VTA1Q9NP79 307 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 COQ4Q9Y3A0 265 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 DUSP10Q9Y6W6 482 aa15.56■□□□□ 0.08
RTFDC1-201ENST00000023939 SIP14410 1827 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 IGKV6-21A0A0C4DH24 114 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 HNRNPDLO14979 420 aaKnown RBP15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 TACC1O75410 805 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 HSDL1Q3SXM5 330 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 GJB7Q6PEY0 223 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 ARMCX2Q7L311 632 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 SRGAP1Q7Z6B7 1085 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 VPS36Q86VN1 386 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 GPD1LQ8N335 351 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 ZSWIM2Q8NEG5 633 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 DEPTORQ8TB45 409 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 POMGNT1Q8WZA1 660 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 UBXN4Q92575 508 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 GPR88Q9GZN0 384 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 TMEM117Q9H0C3 514 aa15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 ZNFX1Q9P2E3 1918 aaKnown RBP15.55■□□□□ 0.08
RTFDC1-201ENST00000023939 NOP56O00567 594 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 TXNP10599 105 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 MXI1P50539 228 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 RBM10P98175 930 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ARID5AQ03989 594 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 CYP24A1Q07973 514 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 STRN3Q13033 797 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 BMS1Q14692 1282 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 DRAP1Q14919 205 aaPredicted RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ELF2Q15723 593 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 NAB2Q15742 525 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ERCC6LQ2NKX8 1250 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 IER5Q5VY09 327 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 SLFN12LQ6IEE8 588 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 MAMDC4Q6UXC1 1216 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ANKRD13CQ8N6S4 541 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 TCP11Q8WWU5 503 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 SPATA33Q96N06 139 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 PARK7Q99497 189 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 SYT11Q9BT88 431 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 SMARCAD1Q9H4L7 1026 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 TMEM8AQ9HCN3 771 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ADAMTS1Q9UHI8 967 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 JRKLQ9Y4A0 524 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 MACROD2A1Z1Q3 448 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 GOLGA8IPA6NC78 632 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 GOLGA8JA6NMD2 632 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 EXTL3O43909 919 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 CELF2O95319 508 aaKnown RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 PRLRP16471 622 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ADORA2AP29274 412 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 GCLMP48507 274 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 CLDN10P78369 228 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 KRT39Q6A163 491 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 PHLDB3Q6NSJ2 640 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 GLG1Q92896 1179 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 EMID1Q96A84 441 aaPredicted RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 SAAL1Q96ER3 474 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ALS2CR12Q96Q35 445 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms