RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Tac1P41539 130 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ssxb5Q6XAS2 159 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyfip1Q7TMB8 1253 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Prkag3Q8BGM7 489 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ppfia2Q8BSS9 1257 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sulf1Q8K007 870 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Agr3Q8R3W7 165 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Llcfc1Q9D9P8 108 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Nudt12Q9DCN1 462 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rilpl1Q9JJC6 406 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Kcnq5Q9JK45 933 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Usp14Q9JMA1 493 aaKnown RBP12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mt-CybP00158 381 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 CatspereP0DP43 985 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp11b1Q3TG86 501 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mars2Q499X9 586 aaKnown RBP12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Odr4Q4PJX1 447 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 SnphQ80U23 495 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Usp38Q8BW70 1042 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fam53cQ8BXQ8 393 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Dync1li1Q8R1Q8 523 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ubxn2aQ99KJ0 258 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tmod3Q9JHJ0 352 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 PlekQ9JHK5 350 aaKnown RBP12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Foxo4Q9WVH3 505 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 DtnbO70585 659 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Chn2Q80XD1 332 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Abtb1Q99LJ2 478 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ing2Q9ESK4 281 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rnf4Q9QZS2 194 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ankrd63A2ARS0 390 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 P01734 135 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 EsrrgP62509 458 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ckap2Q3V1H1 664 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ptrh1Q8BW00 204 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Taf11Q99JX1 211 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 PycardQ9EPB4 193 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Hebp1Q9R257 190 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Flt4P35917 1363 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Herc3A6H6S0 1050 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm10392Q3V3I3 114 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Krt42Q6IFX2 452 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Dclk2Q6PGN3 756 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tmtc4Q8BG19 741 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Suds3Q8BR65 328 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 HlfQ8BW74 295 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Klhl11Q8CE33 709 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Btbd7Q8CFE5 1130 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Pspc1Q8R326 523 aaKnown RBP12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Trub2Q91WG3 331 aaKnown RBP12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Hao1Q9WU19 370 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Kif9Q9WV04 790 aa12.42□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rnf19bA2A7Q9 732 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mocs3A2BDX3 460 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fam47eD3YWC7 402 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm6588E9Q3K0 461 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ets2P15037 468 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ints2Q80UK8 1198 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rpa1Q8VEE4 623 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tceal1Q921P9 165 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Polr3cQ9D483 533 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp2d9P11714 504 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Kcna3P16390 528 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Taf1bP97358 586 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 4930502E18RikQ14BQ3 236 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ccdc84Q4VA36 332 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Myo19Q5SV80 963 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Caprin1Q60865 707 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Q80ZQ3 298 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tgif2lx2Q8K5B9 231 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Trex1Q91XB0 314 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Trim7Q923T7 510 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Utp11Q9CZJ1 253 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sucla2Q9Z2I9 463 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp2c68K7N6C2 491 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Msr1P30204 458 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mcl1P97287 331 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mettl17Q3U2U7 461 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Heatr9Q5QNV8 569 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Otud6aQ6IE21 290 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Stambpl1Q76N33 436 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp26b1Q811W2 512 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Alpk1Q9CXB8 1231 aa12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 RnmtQ9D0L8 465 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 PygmQ9WUB3 842 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Twf2Q9Z0P5 349 aaKnown RBP12.41□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Knl1Q66JQ7 1612 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Kcnh4A2A5F7 1018 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm3402K7N5P2 326 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Smg5Q6ZPY2 1017 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Zfp454Q80Y34 536 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Stxbp5Q8K400 1152 aaKnown RBP12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Acat1Q8QZT1 424 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sumf1Q8R0F3 372 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Trpv6Q91WD2 767 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Atp11cQ9QZW0 1129 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Arhgap33Q80YF9 1305 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Per2O54943 1257 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Atp9bP98195 1146 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tfdp1Q08639 410 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms