RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Pcdhgb4Q91XX6 912 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Nop56Q9D6Z1 580 aaKnown RBP14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tnfrsf10bQ9QZM4 381 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ccdc88cQ6VGS5 2009 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Cfap221A9Q751 836 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Efna5O08543 228 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Kif2aP28740 705 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Nfe2Q07279 373 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 HelqQ2VPA6 1069 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Rasal3Q8C2K5 1041 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Calhm6Q8C9E8 313 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Rnf103Q9R1W3 683 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ankrd2Q9WV06 328 aa14.36□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Col5a2Q3U962 1497 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Slc3a2P10852 526 aaKnown RBP14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Hace1Q3U0D9 909 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Skap2Q3UND0 358 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 EtnpplQ8BWU8 499 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Inpp5fQ8CDA1 1132 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Prkag2Q91WG5 566 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Krt71Q9R0H5 524 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Xirp1O70373 1129 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Myl1P05977 188 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Fam167bP17257 162 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Trap1aP19473 224 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tgfbrap1Q3UR70 860 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Senp5Q6NXL6 749 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ndfip2Q91ZP6 311 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tom1l1Q923U0 474 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ppp1r3gQ9CW07 347 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tube1Q9D6T1 475 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ccdc91Q9D8L5 442 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Cops5O35864 334 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Aoc3O70423 765 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Mov10P23249 1004 aaKnown RBP14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ctnna1P26231 906 aaKnown RBP14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pla2g6P97819 807 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Btg1-ps1Q3V0S2 161 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Btg1-ps2Q3V0X0 161 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Gngt1Q61012 74 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Gm5622Q810Q0 167 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Olfr1494Q8VGP8 315 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Strn3Q9ERG2 796 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tacc3Q9JJ11 631 aa14.35□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Gpr161B2RPY5 545 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Rgs22G3UYX5 1258 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Cyp2b10P12791 500 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Mdh1P14152 334 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Lig1P37913 916 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ndufs6P52503 116 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 SelpQ01102 768 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Trim72Q1XH17 477 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 SpoplQ2M2N2 392 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Kctd19Q562E2 927 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tmem130Q6NXM3 419 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tas2r134Q7TQB0 298 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Gga1Q8R0H9 635 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pomgnt1Q91X88 660 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Trim66Q924W6 1242 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Atp13a1Q9EPE9 1200 aaKnown RBP14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Caln1Q9JJG7 219 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pcsk1nQ9QXV0 258 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Vmn2r121A2BE32 847 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Lrrc4bP0C192 709 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Dynlt1P51807 113 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Slc12a2P55012 1205 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pcsk7Q61139 770 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 IqceQ6PCQ0 778 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Btnl9Q8BJE2 536 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pkn2Q8BWW9 983 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Camkk2Q8C078 588 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Snap47Q8R570 413 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ranbp17Q99NF8 1088 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Psmg1Q9JK23 289 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tlr5Q9JLF7 859 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tll2Q9WVM6 1012 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 DffaO54786 331 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Foxd4Q60688 444 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Gbp4Q61107 620 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Adam6bQ6IMH7 756 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tph2Q8CGV2 488 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 PdgfdQ925I7 370 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Six6os1Q9CTN5 574 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Spata17Q9D552 379 aa14.34□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Stk10O55098 966 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 VimP20152 466 aaKnown RBP14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 DesP31001 469 aaKnown RBP14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pou6f1Q07916 301 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Trim43aQ3TL54 445 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Pacsin1Q61644 441 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Gba2Q69ZF3 918 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Ces5aQ6AW46 575 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Retreg2Q6NS82 541 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Cypt2Q6P924 180 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Garem2Q6PAJ3 880 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Havcr2Q8VIM0 281 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Akr1c14Q91WT7 323 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Tmem79Q9D709 391 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Dnajc7Q9QYI3 494 aa14.33□□□□□ -0.11
Clcn3-204ENSMUST00000110301 Vav3Q9R0C8 847 aa14.33□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms