RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Frat1P70339 274 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Zc3h18Q0P678 948 aaKnown RBP13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Cd180Q62192 661 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Ntan1Q64311 310 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Suz12Q80U70 741 aaKnown RBP13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Dnph1Q80VJ3 173 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Traf3ip3Q8C0G2 513 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Q8C5C9 218 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Adgrg3Q8R0T6 542 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Smc1bQ920F6 1248 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Ddx27Q921N6 760 aaKnown RBP13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 TtpalQ9D3D0 343 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 DcpsQ9DAR7 338 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 B4galt5Q9JMK0 388 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Ercc4Q9QZD4 917 aa13.02□□□□□ -0.32
Ldb3-204ENSMUST00000064098 Gm5580A0A0N4SVP8 411 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Lcmt1A0A0U1RNF2 332 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Trim12cD3Z3L3 497 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Tp53P02340 387 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Cdkn1cP49919 348 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 PrkcbP68404 671 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Mpzl3Q3V3F6 237 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Asap3Q5U464 904 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Atp13a4Q5XF90 1193 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 IbspQ61711 324 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Q8BGN9 141 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 4933409G03RikQ8C5U0 320 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Hspbp1Q99P31 357 aaKnown RBP13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Klhl10Q9D5V2 608 aa13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Myo5aQ99104 1853 aaKnown RBP13.02□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Nup210lQ9D2F7 1881 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ttll8A4Q9F1 832 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Gm12800B1AUV4 484 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Pate3B3GLJ3 98 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Gm12794L7MTS5 483 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Fmr1P35922 614 aaKnown RBP13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Pdrg1P59048 133 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Kcnd1Q03719 651 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Oas1fQ14AZ4 364 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 EregQ61521 162 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Slc7a6osQ7TPE5 306 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Mapk15Q80Y86 549 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 SucoQ8C341 1250 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Bud13Q8R149 637 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Arl8aQ8VEH3 186 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Atp13a1Q9EPE9 1200 aaKnown RBP13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Morc1Q9WVL5 950 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Vstm4T1NXB5 319 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Cdr2lA2A6T1 465 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Mmrn2A6H6E2 943 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ptchd4B9EKX1 904 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ccdc152E9PX14 254 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Cd86P42082 309 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 SnrpfP62307 86 aaKnown RBP13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Git1Q68FF6 770 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ankfy1Q810B6 1169 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 6820408C15RikQ8BJX2 354 aa13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Brd3Q8K2F0 726 aaKnown RBP13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Rbm42Q91V81 474 aaKnown RBP13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ftsj3Q9DBE9 838 aaKnown RBP13.01□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Lama3Q61789 3330 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Nlrc5C3VPR6 1915 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Gucy2dA0A0U1RPR8 1117 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Etnk2A7MCT6 385 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Vmn2r87E9PZX4 848 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Gimap9G3X987 291 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Kng1O08677 661 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Hps5P59438 1126 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 IqceQ6PCQ0 778 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Rhbdf1Q6PIX5 856 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ankrd24Q80VM7 985 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ccdc169Q8BXX9 214 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 NcaphQ8C156 731 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Vps52Q8C754 723 aaKnown RBP13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Mfap3lQ9D3X9 409 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 PrameQ9D4Z5 464 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Asah2Q9JHE3 756 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Trpm5Q9JJH7 1158 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Gon4lQ9DB00 2260 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Myo1aO88329 1043 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 GcP21614 476 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ptpn11P35235 597 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Cct6aP80317 531 aaKnown RBP13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ddx10Q80Y44 875 aaKnown RBP13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Elac2Q80Y81 831 aaKnown RBP13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ccser1Q8C0C4 895 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Slc9b1Q8C0X2 565 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Tcp11l2Q8K1H7 517 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Ero1aQ8R180 464 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Zfp64Q99KE8 643 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 VasnQ9CZT5 673 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Abcb6Q9DC29 842 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Slc15a2Q9ES07 729 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Slc5a4aQ9ET37 656 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Tlr5Q9JLF7 859 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Mettl1Q9Z120 268 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Arih1Q9Z1K5 555 aa13□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Btbd1P58544 488 aa12.99□□□□□ -0.33
Ldb3-204ENSMUST00000064098 Arf4P61750 180 aa12.99□□□□□ -0.33
Ldb3-204ENSMUST00000064098 SPINDOCQ05AH6 381 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms