RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Fam92bQ3V2J0 292 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Arhgap10Q6Y5D8 786 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 RimklbQ80WS1 387 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 NrcamQ810U4 1256 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Phf20l1Q8CCJ9 1013 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ago2Q8CJG0 860 aaKnown RBP9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Usp26Q99MX1 835 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Med7Q9CZB6 233 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gtf3c6Q9D8P7 227 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 LrmdaQ9D9B4 229 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sept6Q9R1T4 434 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 DtnbO70585 659 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Il13ra2O88786 383 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 FechP22315 420 aaKnown RBP9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tatdn3Q3U1C6 294 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ddx3xQ62167 662 aaKnown RBP9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tgoln2Q62314 363 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Q8BGD0 127 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ppme1Q8BVQ5 386 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Upb1Q8VC97 393 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Nup98Q6PFD9 1816 aaKnown RBP9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Myh6Q02566 1938 aaKnown RBP9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Oog1E9Q5G7 496 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gap43P06837 227 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Atp8a1P70704 1164 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ece1Q4PZA2 769 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fam214aQ69ZK7 1075 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Znf12Q7TSI0 686 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fbxo44Q8BK26 255 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Emc2Q9CRD2 297 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Trim10Q9WUH5 489 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 P01734 135 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Becn2P0DM65 447 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 PrkceP16054 737 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ca8P28651 291 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 SpertQ32MG2 446 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 FdxrQ61578 494 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pacsin1Q61644 441 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Krt77Q6IFZ6 572 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sash3Q8K352 380 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pdk2Q9JK42 407 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Skint3A7TZF0 458 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Klrg2Q3UM83 387 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Siglec10Q80ZE3 688 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Q80ZQ3 298 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Lsm14bQ8CGC4 385 aaKnown RBP9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Msantd4Q91YU3 345 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nop56Q9D6Z1 580 aaKnown RBP9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Stk32bQ9JJX8 414 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mettl1Q9Z120 268 aa9.09□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 MtrA6H5Y3 1253 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Unc13dB2RUP2 1085 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vti1aO89116 217 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ctnnd1P30999 938 aaKnown RBP9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tbx3P70324 741 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Emc10Q3TAS6 258 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ttf2Q5NC05 1138 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gpt2Q8BGT5 522 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Olfr390Q8VEZ7 311 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 F11Q91Y47 624 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm7995L7N2E4 160 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vamp7P70280 220 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Spa17Q62252 149 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nsun6Q7TS68 476 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Pgm5Q8BZF8 567 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Sept11Q8C1B7 431 aaKnown RBP9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ttc16Q8C1F5 767 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 N4bp3Q8C7U1 537 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ergic2Q9CR89 377 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Golga1Q9CW79 758 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Krt7Q9DCV7 457 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Plch1Q4KWH5 1682 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 6030498E09RikB1AX85 169 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Magea5O89009 320 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Magea8O89012 320 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Casp14O89094 257 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Xrcc6P23475 608 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 IvlP48997 467 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Palb2Q3U0P1 1104 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Klra6Q60653 266 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Wdr44Q6NVE8 915 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Magea3Q6T340 320 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Atg4cQ811C2 458 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 L3mbtl3Q8BLB7 883 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Anxa9Q9JHQ0 345 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc6a16A0A1L1SR47 742 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Sertad2Q9JJG5 309 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cdc42ep4Q9JM96 349 aaKnown RBP9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ptf1aQ9QX98 324 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Pacsin2Q9WVE8 486 aaKnown RBP9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Myh15E9Q264 1925 aa9.08□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ace3D0G895 737 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tcp10bE9PYJ0 438 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Usp4P35123 962 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 UrosP51163 265 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gtf2bP62915 316 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 StamP70297 548 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rnf113a2Q14B01 337 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 EsrrbQ61539 433 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Lrrc57Q9D1G5 239 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms