RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Dync1li2Q6PDL0 492 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Peg10Q7TN75 958 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 3830417A13RikQ8BQJ2 303 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Dennd1aQ8K382 1016 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Pcdhb3Q91XZ7 784 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cep19Q9CQA8 163 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Riok3Q9DBU3 519 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 ErmapQ9JLN5 566 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rasgrp1Q9Z1S3 795 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm11549A0A286YD83 63 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Nr1i3O35627 358 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Eno1P17182 434 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 NppbP40753 121 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Eef1dP57776 281 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 NfibP97863 570 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ddr1Q03146 911 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Lmntd2Q0VET5 664 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Kiaa1328Q6NZK5 612 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 IarsQ8BU30 1262 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 WaslQ91YD9 501 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 MtrA6H5Y3 1253 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Senp1P59110 640 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 SpoplQ2M2N2 392 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rufy4Q3TYX8 563 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 FaxcQ3UMF9 409 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Sfi1Q3UZY0 1216 aaKnown RBP17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ddx31Q6NZQ2 687 aaKnown RBP17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Daam2Q80U19 1115 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rusc1Q8BG26 893 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rapgef5Q8C0Q9 814 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm14525B1AZA0 212 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm2012B1B0R1 212 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Hsf3D0VYS2 492 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Esr2O08537 530 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 AfpP02772 605 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ppp3caP63328 521 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Six2Q62232 296 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm14819Q62478 212 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cyfip1Q7TMB8 1253 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 PdxkQ8K183 312 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Apbb1ipQ8R5A3 670 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rpap2Q8VC34 614 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 SfpqQ8VIJ6 699 aaKnown RBP17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Vav3Q9R0C8 847 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rfwd2Q9R1A8 733 aaKnown RBP17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Mmrn1B2RPV6 1210 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Krt8P11679 490 aaKnown RBP17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Klrg2Q3UM83 387 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Tmem120aQ8C1E7 343 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Pkn3Q8K045 878 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Usp11Q99K46 921 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ddah1Q9CWS0 285 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gyg1Q9R062 333 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Lactbl1S4R213 581 aa17.42■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm5737A0A140LI11 423 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cep85lA0A1W2P884 806 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cyth3O08967 399 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Magea1O89006 320 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Magea5O89009 320 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Marcksl1P28667 200 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Pon1P52430 355 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Miga1Q4QQM5 600 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Tab3Q571K4 716 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Nlrp4fQ66X05 959 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Snip1Q8BIZ6 383 aaKnown RBP17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Pdxdc1Q99K01 787 aaKnown RBP17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Tmem79Q9D709 391 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cnga3Q9JJZ8 631 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Magea2Q9R2A2 320 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Fyb2A2A995 729 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Mnat1P51949 309 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ugt1a2P70691 533 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 PrimpolQ6P1E7 537 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Nucks1Q80XU3 234 aaKnown RBP17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Dusp4Q8BFV3 398 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Reep2Q8VCD6 254 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Nudt12Q9DCN1 462 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Uts2Q9QZQ3 123 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Zfp646Q6NV66 1788 aa17.41■□□□□ 0.38
Trim28-201ENSMUST00000005705 Armc3A2AU72 881 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm10110D3Z5M2 615 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ccdc85cE9Q6B2 420 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm4758L7N258 96 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Tph1P17532 447 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 LxnP70202 222 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Mboat7Q8CHK3 473 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Slc26a6Q8CIW6 758 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ints9Q8K114 658 aaKnown RBP17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Fthl17aQ9DAX0 182 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Txnrd2Q9JLT4 524 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Serpinb6cW4VSP4 379 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Phrf1A6H619 1682 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gm28360A0A087WR25 190 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cfap70D3YVL2 1141 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 PctpP53808 214 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Agap1Q8BXK8 857 aaKnown RBP17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Plekhg6Q8R0J1 787 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 AdigQ8R400 80 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Cfap57Q9D180 1249 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rnf4Q9QZS2 194 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms