RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 DEFB115Q30KQ5 88 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 IQSEC1Q6DN90 963 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 SYT10Q6XYQ8 523 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 ZC3H3Q8IXZ2 948 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 EXOC8Q8IYI6 725 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 MSL3Q8N5Y2 521 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 TMEM161BQ8NDZ6 487 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 NEK11Q8NG66 645 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 TCP11Q8WWU5 503 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 SOCS4Q8WXH5 440 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 CAPNS2Q96L46 248 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 STRA6Q9BX79 667 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 KATNBL1Q9H079 304 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 DHX33Q9H6R0 707 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 METTL14Q9HCE5 456 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 PDLIM7Q9NR12 457 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 FAM53CQ9NYF3 392 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 ERAP1Q9NZ08 941 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 FAM184BQ9ULE4 1060 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 TBX20Q9UMR3 447 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 DYNC1LI2O43237 492 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 HBP1O60381 514 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 MAFO75444 373 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 AKAP3O75969 853 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 AFPP02771 609 aaKnown RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 GYPCP04921 128 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 ZNF286BP0CG31 522 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 KRT13P13646 458 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 CYP2C19P33261 490 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 KRT9P35527 623 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 MATR3P43243 847 aaKnown RBP eCLIP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 PSMC4P43686 418 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 FXR1P51114 621 aaKnown RBP eCLIP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 RTP1P59025 263 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 NOGQ13253 232 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 TARBP2Q15633 366 aaKnown RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 CCL14Q16627 93 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 NFIL3Q16649 462 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 DUSP28Q4G0W2 176 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 ZNF662Q6ZS27 426 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 TMTC1Q8IUR5 882 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 LRRC71Q8N4P6 559 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 CCDC155Q8N6L0 562 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 METTL13Q8N6R0 699 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 RETREG2Q8NC44 543 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 PPTC7Q8NI37 304 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 ASAP3Q8TDY4 903 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 TRAPPC12Q8WVT3 735 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 APBA2Q99767 749 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 JPH2Q9BR39 696 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 ST6GALNAC4Q9H4F1 302 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 FAM207AQ9NSI2 230 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 FLRT1Q9NZU1 646 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 LUC7L2Q9Y383 392 aaKnown RBP9.67□□□□□ -0.86
PHGDH-219ENST00000641513 PPME1Q9Y570 386 aa9.67□□□□□ -0.86
PHGDH-219ENST00000641513 TTC26A0AVF1 554 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 GOLGA8IPA6NC78 632 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 GOLGA8JA6NMD2 632 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 TISP43B9A030 160 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ANKRD63C9JTQ0 380 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 K7ERI5 159 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 HNRNPDLO14979 420 aaKnown RBP9.66□□□□□ -0.86
PHGDH-219ENST00000641513 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 GLRA2P23416 452 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ABCD1P33897 745 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ARL2P36404 184 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 NAMPTP43490 491 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 LIG4P49917 911 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 GABPB1Q06547 395 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-219ENST00000641513 KIF22Q14807 665 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 DGKDQ16760 1214 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ZNF484Q5JVG2 852 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 IER5Q5VY09 327 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 CACNA2D4Q7Z3S7 1137 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ZBTB8OSQ8IWT0 167 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 XXYLT1Q8NBI6 393 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 PSPC1Q8WXF1 523 aaKnown RBP9.66□□□□□ -0.86
PHGDH-219ENST00000641513 POMGNT1Q8WZA1 660 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 TSC1Q92574 1164 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-219ENST00000641513 CBWD1Q9BRT8 395 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 CRACR2AQ9BSW2 395 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 MKNK1Q9BUB5 465 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ARHGAP39Q9C0H5 1083 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 RNPEPQ9H4A4 650 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 DMAC2Q9NW81 257 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ARGLU1Q9NWB6 273 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ZNHIT6Q9NWK9 470 aaKnown RBP9.66□□□□□ -0.86
PHGDH-219ENST00000641513 HSPBP1Q9NZL4 362 aa9.66□□□□□ -0.86
PHGDH-219ENST00000641513 ANK1P16157 1881 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms