RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 GBP3Q9H0R5 595 aa21.8■■□□□ 1.08
PHGDH-210ENST00000641115 C2orf40Q9H1Z8 148 aa21.8■■□□□ 1.08
PHGDH-210ENST00000641115 TBX20Q9UMR3 447 aa21.8■■□□□ 1.08
PHGDH-210ENST00000641115 TRAF3IP3Q9Y228 551 aa21.8■■□□□ 1.08
PHGDH-210ENST00000641115 FGFR1OPO95684 399 aaKnown RBP21.79■■□□□ 1.08
PHGDH-210ENST00000641115 GJB1P08034 283 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 EFNA5P52803 228 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 PLCB2Q00722 1185 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 STRN3Q13033 797 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 EDRF1Q3B7T1 1238 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 SESTD1Q86VW0 696 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 KCNN1Q92952 543 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 HSD3B7Q9H2F3 369 aa21.79■■□□□ 1.08
PHGDH-210ENST00000641115 TREHO43280 583 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 FKBP3Q00688 224 aaKnown RBP21.78■■□□□ 1.08
PHGDH-210ENST00000641115 ITGA7Q13683 1181 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 HIC1Q14526 733 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 CDCA2Q69YH5 1023 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-210ENST00000641115 MAP4K3Q8IVH8 894 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 GOLGA5Q8TBA6 731 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 SRRTQ9BXP5 876 aaKnown RBP21.78■■□□□ 1.08
PHGDH-210ENST00000641115 FAM49AQ9H0Q0 323 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-210ENST00000641115 THAP9Q9H5L6 903 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 TMEM134Q9H6X4 195 aa21.78■■□□□ 1.08
PHGDH-210ENST00000641115 SAMSN1Q9NSI8 373 aaKnown RBP21.78■■□□□ 1.08
PHGDH-210ENST00000641115 K7ERI5 159 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 DNM1LO00429 736 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 VTNP04004 478 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 CDK11BP21127 795 aaKnown RBP21.77■■□□□ 1.08
PHGDH-210ENST00000641115 HSP90AA4PQ58FG1 418 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 KIAA0319LQ8IZA0 1049 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 ZNF333Q96JL9 665 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 SCLT1Q96NL6 688 aa21.77■■□□□ 1.08
PHGDH-210ENST00000641115 A0A1W2PQ45 241 aaPredicted RBP21.77■■□□□ 1.07
PHGDH-210ENST00000641115 A0A1W2PQY0 241 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 TGFB1I1O43294 461 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 ZNF18P17022 549 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 RPL13P26373 211 aaKnown RBP21.77■■□□□ 1.07
PHGDH-210ENST00000641115 PHKA2P46019 1235 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 ZNF200P98182 395 aaPredicted RBP21.77■■□□□ 1.07
PHGDH-210ENST00000641115 CDC42EP1Q00587 391 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 POU5F1BQ06416 359 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 CDKAL1Q5VV42 579 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 TAF2Q6P1X5 1199 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 RUFY4Q6ZNE9 571 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 FAM114A1Q8IWE2 563 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 ANP32BQ92688 251 aaKnown RBP21.77■■□□□ 1.07
PHGDH-210ENST00000641115 ARMC5Q96C12 935 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 NFKBIZQ9BYH8 718 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 STARD7Q9NQZ5 370 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 CGNQ9P2M7 1197 aaKnown RBP21.77■■□□□ 1.07
PHGDH-210ENST00000641115 OGDHLQ9ULD0 1010 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 PHF24Q9UPV7 400 aa21.77■■□□□ 1.07
PHGDH-210ENST00000641115 SNRPFP62306 86 aaKnown RBP21.76■■□□□ 1.07
PHGDH-210ENST00000641115 PTPN11Q06124 597 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-210ENST00000641115 SPAG1Q07617 926 aa21.76■■□□□ 1.07
PHGDH-210ENST00000641115 GDF6Q6KF10 455 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-210ENST00000641115 ZNF410Q86VK4 478 aa21.76■■□□□ 1.07
PHGDH-210ENST00000641115 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
PHGDH-210ENST00000641115 NLRP7Q8WX94 980 aa21.76■■□□□ 1.07
PHGDH-210ENST00000641115 BICD1Q96G01 975 aa21.76■■□□□ 1.07
PHGDH-210ENST00000641115 MAGEC2Q9UBF1 373 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-210ENST00000641115 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
PHGDH-210ENST00000641115 ATP1A3P13637 1013 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 NR2F2P24468 414 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 GPC3P51654 580 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 PTENP60484 403 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 MAPK6Q16659 721 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 ZNF668Q96K58 619 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-210ENST00000641115 CEP63Q96MT8 703 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 PPP1R16BQ96T49 567 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 AGPAT3Q9NRZ7 376 aa21.75■■□□□ 1.07
PHGDH-210ENST00000641115 GRIN2DO15399 1336 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 A0A087WZ62 844 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 CETN3O15182 167 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 NR3C1P04150 777 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 NLRP11P59045 1033 aaKnown RBP21.74■■□□□ 1.07
PHGDH-210ENST00000641115 ADAM9Q13443 819 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 NFIL3Q16649 462 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 LRRC55Q6ZSA7 311 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 TAS1R3Q7RTX0 852 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 ZNF710Q8N1W2 664 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 DNAJB3Q8WWF6 145 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 EEF2KMTQ96G04 330 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 FDXACB1Q9BRP7 624 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-210ENST00000641115 IKZF4Q9H2S9 585 aa21.74■■□□□ 1.07
PHGDH-210ENST00000641115 A0A0U1RQG5 324 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-210ENST00000641115 KCNJ18B7U540 433 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 INO80B-WBP1J3KQ70 363 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 CLIC2O15247 247 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 SERPINC1P01008 464 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 RPLP2P05387 115 aaKnown RBP21.73■■□□□ 1.07
PHGDH-210ENST00000641115 LIG4P49917 911 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 KCNJ12Q14500 433 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 SARM1Q6SZW1 724 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 IFNLR1Q8IU57 520 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-210ENST00000641115 CREBRFQ8IUR6 639 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 NME8Q8N427 588 aa21.73■■□□□ 1.07
PHGDH-210ENST00000641115 INO80BQ9C086 356 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-210ENST00000641115 CCDC113Q9H0I3 377 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms