RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	NAA25	Q14CX7	972 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	CALR3	Q96L12	384 aa	Known RBP	18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	C2orf40	Q9H1Z8	148 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZWILCH	Q9H900	591 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	RNF181	Q9P0P0	153 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	TRIM10	Q9UDY6	481 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	GRID2IP	A4D2P6	1211 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	VSNL1	P62760	191 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	CDO1	Q16878	200 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	RIT2	Q99578	217 aa		18.83	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZSCAN20	P17040	1043 aa	Predicted RBP	18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	MSH2	P43246	934 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	FMO5	P49326	533 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	CATSPER3	Q86XQ3	398 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZNF280C	Q8ND82	737 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	RBM41	Q96IZ5	413 aa	Known RBP	18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	PFAS	O15067	1338 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	SLC9A1	P19634	815 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	ITK	Q08881	620 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	PRMT6	Q96LA8	375 aa	Predicted RBP	18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZDHHC15	Q96MV8	337 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	TIPIN	Q9BVW5	301 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	MRPL4	Q9BYD3	311 aa	Known RBP	18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	XKR3	Q5GH77	459 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	C6orf118	Q5T5N4	469 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	ARMCX2	Q7L311	632 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	ERGIC2	Q96RQ1	377 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	KBTBD4	Q9NVX7	518 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	HSPBP1	Q9NZL4	362 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	FAM205A	Q6ZU69	1335 aa		18.82	■□□□□ 0.6
SCARB2-223	ENST00000640640	CCDC160	A6NGH7	325 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	SART1	O43290	800 aa	Known RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	CALB1	P05937	261 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	GNA15	P30679	374 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	GGCX	P38435	758 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	ABI1	Q8IZP0	508 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	BEGAIN	Q9BUH8	593 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	STK33	Q9BYT3	514 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	APEX2	Q9UBZ4	518 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	STAT5B	P51692	787 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	TNFAIP2	Q03169	654 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	ADCY2	Q08462	1091 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	NYAP1	Q6ZVC0	841 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	MXRA8	Q9BRK3	442 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	TOPORS	Q9NS56	1045 aa	Predicted RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	FBXO28	Q9NVF7	368 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	CP	P00450	1065 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZNF18	P17022	549 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	GRB10	Q13322	594 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	COL23A1	Q86Y22	540 aa	Predicted RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	SIX6OS1	Q8N1H7	587 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	RBM46	Q8TBY0	533 aa	Known RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	AGPAT1	Q99943	283 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	RRP15	Q9Y3B9	282 aa	Known RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	NOC2L	Q9Y3T9	749 aa	Known RBP	18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640		A0A1B0GUA9	196 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	AP5Z1	O43299	807 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	SAT1	P21673	171 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	METTL23	Q86XA0	190 aa		18.81	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZNF185	O15231	689 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	LMBRD2	Q68DH5	695 aa	Predicted RBP	18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	AGBL1	Q96MI9	1066 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	SPATA33	Q96N06	139 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	FHOD1	Q9Y613	1164 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	C19orf81	C9J6K1	198 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	CYP26A1	O43174	497 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	GMNN	O75496	209 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	ZBED1	O96006	694 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	KLK7	P49862	253 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	GPC3	P51654	580 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	CENPU	Q71F23	418 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	RNF25	Q96BH1	459 aa	Predicted RBP	18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	EVI5	O60447	810 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	CLTA	P09496	248 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	KCTD17	Q8N5Z5	321 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	COG1	Q8WTW3	980 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	IL1R1	P14778	569 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	PDCL	Q13371	301 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	DNAAF3	Q8N9W5	541 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	ACER1	Q8TDN7	264 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	PYROXD1	Q8WU10	500 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	STRIP2	Q9ULQ0	834 aa		18.8	■□□□□ 0.6
SCARB2-223	ENST00000640640	SALL1	Q9NSC2	1324 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	GALC	P54803	685 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	UBE4B	O95155	1302 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	CYP11B2	P19099	503 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	SLC15A2	Q16348	729 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	DUOXA2	Q1HG44	320 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	TSNAXIP1	Q2TAA8	658 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	ILDR1	Q86SU0	546 aa	Predicted RBP	18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	LRRC1	Q9BTT6	524 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	MYOZ2	Q9NPC6	264 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	KCNH7	Q9NS40	1196 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	MSH4	O15457	936 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	PLS3	P13797	630 aa		18.79	■□□□□ 0.6
SCARB2-223	ENST00000640640	CHRNA3	P32297	505 aa		18.79	■□□□□ 0.6

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